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Ising Model of Cardiac Thin Filament Activation with Nearest-Neighbor Cooperative Interactions
Authors:John Jeremy Rice   Gustavo Stolovitzky   Yuhai Tu     Pieter P. de Tombe
Affiliation:* IBM T. J. Watson Research Center, Yorktown Heights, New York 10598
Physiology &; Biophysics, University of Illinois, Chicago, Illinois 60607
Abstract:We have developed a model of cardiac thin filament activation using an Ising model approach from equilibrium statistical physics. This model explicitly represents nearest-neighbor interactions between 26 troponin/tropomyosin units along a one-dimensional array that represents the cardiac thin filament. With transition rates chosen to match experimental data, the results show that the resulting force-pCa (F-pCa) relations are similar to Hill functions with asymmetries, as seen in experimental data. Specifically, Hill plots showing (log(F/(1-F)) vs. log [Ca]) reveal a steeper slope below the half activation point (Ca50) compared with above. Parameter variation studies show interplay of parameters that affect the apparent cooperativity and asymmetry in the F-pCa relations. The model also predicts that Ca binding is uncooperative for low [Ca], becomes steeper near Ca50, and becomes uncooperative again at higher [Ca]. The steepness near Ca50 mirrors the steep F-pCa as a result of thermodynamic considerations. The model also predicts that the correlation between troponin/tropomyosin units along the one-dimensional array quickly decays at high and low [Ca], but near Ca50, high correlation occurs across the whole array. This work provides a simple model that can account for the steepness and shape of F-pCa relations that other models fail to reproduce.
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