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An Efficient Timer and Sizer of Biomacromolecular Motions
Institution:1. Institute of Bioinformatics and Structural Biology, National Tsing Hua Univ., No. 101, Section 2, Kuang-Fu Road, Hsinchu 30013, Taiwan;2. Bioinformatics Program, Taiwan International Graduate Program, Institute of Information Science, Academia Sinica, Taipei, Taiwan;3. School of Life Science and Technology, Tokyo Institute of Technology, M6-13, 2-12-1 Ookayama, Meguro, Tokyo 152-8550, Japan;4. Institute of Molecular and Cellular Biology, National Taiwan University, Taipei, Taiwan;5. XFEL Utilization Division, Japan Synchrotron Radiation Research Institute, 1-1-1 Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5198, Japan;6. Physics Division, National Center for Theoretical Sciences, Hsinchu, Taiwan
Abstract:
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  • Keywords:protein dynamics  molecular dynamics simulations  principal component analysis (PCA)  elastic network model (ENM)  Wiener-Khintchine theorem  time-correlation function  power spectrum  anharmonicity  order parameter  ribosome
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