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Comparative molecular dynamics simulations of histone deacetylase-like protein: binding modes and free energy analysis to hydroxamic acid inhibitors
Authors:Yan Chunli  Xiu Zhilong  Li Xiaohui  Li Shenmin  Hao Ce  Teng Hu
Institution:Department of Bioscience and Biotechnology, School of Environmental and Biological Science and Technology, Dalian University of Technology, Dalian 116024, People's Republic of China.
Abstract:
Keywords:histone deacetylase  histone deacetylase‐like protein  molecular dynamics simulation  molecular mechanics‐Poisson‐Boltzmann surface area (MM‐PBSA) method  molecular mechanics generalized Born surface area (MM‐GBSA)  mutagenesis  hydroxamic acid inhibitor
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