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Effects of Acetylation and Phosphorylation on Subunit Interactions in Three Large Eukaryotic Complexes
Affiliation:3. KU Leuven, Centre of Microbial and Plant Genetics, Kasteelpark Arenberg 20, Leuven, B-3001, Belgium;4. European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany;5. Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Science4Life, Utrecht University, Utrecht, The Netherlands;6. Netherlands Proteomics Centre, Utrecht, The Netherlands;8. Technical University of Berlin, Berlin, Germany;9. Chair of Proteomics and Bioanalytics, Technical University of Munich, Freising, Germany
Abstract:
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  • Highlights
    • •Novel PTMs detected in native yeast exosome, RNA polymerase II and proteasome.
    • •MD based approach outperforms published tools in predicting PTMs stability effect.
    • •Dynamical approach reveals long range effects of PTMs on subunits binding.
    • •Acetylations may have a role in local stabilization of protein complex formation.
    Keywords:Phosphorylation  Acetylation  Yeast  Structural Biology  Computational Biology  Binding Affinity  Exosome  Proteasome  Proteomics  RNA polymerase II
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