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Clickable gold nanoparticles for streamlining capture,enrichment and release of alkyne-labelled proteins
Affiliation:1. Department of Chemistry, University of Iowa, Iowa City, IA 52242-1294, USA;2. Department of Internal Medicine, University of Nebraska Medical Center, Omaha, NE 68198, USA;3. Department of Pharmacology, University of Iowa, Iowa City, IA 52242-1109, USA;4. Fred and Pamela Buffett Cancer Center, University of Nebraska Medical Center, Omaha, NE 68198, USA;1. Xinjiang Production & Construction Corps Key Laboratory of Protection and Utilization of Biological Resources in Tarim Basin, Tarim University, Alaer 843300, China;2. College of Plant Protection, State & Local Joint Engineering Research Center of Green Pesticide Invention and Application, Nanjing Agricultural University, Nanjing 210095, China;1. Institute of Technical Chemistry of the Ural Branch of the Russian Academy of Sciences, Perm Federal Scientific Centre, Acad. Korolev St. 3, 614013 Perm, Russia;2. Perm State National Research University, Bukirev St. 15, 614990 Perm, Russia;1. Center for Drug Design, Academic Health Center, University of Minnesota, Minneapolis, MN, 55455, USA;2. Department of Veterinary Pathobiology, College of Veterinary Medicine, University of Missouri, Christopher S. Bond Life Sciences Center, Columbia, MO, 65211, USA;3. Department of Molecular Microbiology and Immunology, University of Missouri School of Medicine, Christopher S. Bond Life Sciences Center, Columbia, MO, 65211, USA;4. Laboratory of Biochemical Pharmacology, Department of Pediatrics, Emory University School of Medicine, Atlanta, GA, 30322, USA;5. Department of Microbiology & Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, PA, 15219, USA;6. Department of Biochemistry, University of Missouri, Christopher S. Bond Life Sciences Center, Columbia, MO, 65211, USA;1. School of Pharmacy, The University of Auckland, Auckland 1142, New Zealand;2. Auckland Cancer Society Research Centre, The University of Auckland, New Zealand
Abstract:Alkyne-labelled proteins are generated as key intermediates in the chemical probe-based approaches to proteomics analysis. Their efficient and selective detection and isolation is an important problem. We designed and synthesized azide-functionalized gold nanoparticles as new clickable capture reagents to streamline click chemistry-mediated capture, enrichment and release of the alkyne-labelled proteins in one-pot to expedite the post-labelling analysis. Because hydrophobic surface functionalities are known to render gold nanoparticles poorly water-dispersible, hydrophilic PEG linkers with two different lengths were explored to confer colloidal stability to the clickable capture reagents. We demonstrated the ability of the capture reagents to conjugate the alkyne containing proteins at a nanomolar concentration via click chemistry, which can be immediately followed by their enrichment and elution. Furthermore, a bifunctional clickable capture reagent bearing sulforhodamine and azide groups was shown to conveniently attach a fluorophore to the alkyne-labelled protein upon click capture, which facilitated their rapid detection in the gel analysis.
Keywords:Gold nanoparticles  Clickable capture reagents  Alkyne label  Photoaffinity labelling  Enrichment
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