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Whole genome sequence of Auricularia heimuer (Basidiomycota,Fungi), the third most important cultivated mushroom worldwide
Authors:Yuan Yuan  Fang Wu  Jing Si  Yi-Fan Zhao  Yu-Cheng Dai
Institution:1. Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing 100083, China;2. Institute of Microbiology, Beijing Forestry University, Beijing 100083, China;3. Beijing Genomics Institute, Shenzhen 518083, China
Abstract:Heimuer, Auricularia heimuer, is one of the most famous traditional Chinese foods and medicines, and it is the third most important cultivated mushroom worldwide. The aim of this study is to develop genomic resources for A. heimuer to furnish tools that can be used to study its secondary metabolite production capability, wood degradation ability and biosynthesis of polysaccharides. The genome was obtained from single spore mycelia of the strain Dai 13782 by using combined high-throughput Illumina HiSeq 4000 system with the PacBio RSII long-read sequencing platform. Functional annotation was accomplished by blasting protein sequences with different public available databases to obtain their corresponding annotations. It is 49.76 Mb in size with a N50 scaffold size of 1,350,668 bp and encodes 16,244 putative predicted genes. This is the first genome-scale assembly and annotation for A. heimuer, which is the third sequenced species in Auricularia.
Keywords:Whole genome sequencing  Edible-medicinal fungus  Secondary metabolism
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