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台湾海峡鲐鱼种群遗传结构
引用本文:张丽艳,苏永全,王航俊,王军.台湾海峡鲐鱼种群遗传结构[J].生态学报,2011,31(23):7097-7103.
作者姓名:张丽艳  苏永全  王航俊  王军
作者单位:厦门大学海洋与环境学院,福建厦门,361005
基金项目:云南省科技厅社会事业发展专项(2008CA020);国家自然科学基金项目(41001029)
摘    要:以往研究表明,台湾海峡的鲐鱼分属2个地理种群,即东海种群和闽南——粤东地方种群.为研究这2个种群的遗传结构,对鲐鱼闽东(30尾)和闽南(30尾)种群进行了AFLP分析,8对选择性引物在2个种群60个个体中,共扩增出497个位点,其中多态位点343个.闽东和闽南种群的多态位点比例、Nei遗传多样性指数和Shannon遗传多样性指数分别为57.75%、64.59%,0.1779、0.2123,0.2725和0.3228,2个种群的遗传多样性处于同一水平.与其他鱼类对比显示,台湾海峡鲐鱼种群的遗传多样性水平高.生境广及生命周期短被认为是台湾海峡鲐鱼具有较高遗传变异水平的原因;基因分化系数Gst、Shannon遗传多样性指数和AMOVA分析均显示鲐鱼的遗传变异主要来源于种群内,而种群间无明显的遗传分化.Nm显示2个种群间基因交流频繁.种群的显性基因型频率分布显示2个种群有基本相同的种群遗传结构.结果表明,鲐鱼闽东和闽南种群间无明显的遗传差异.幼体较强的扩散能力、海洋环流及洄游特性可能是造成台湾海峡鲐鱼种群间遗传同质性较高的原因.

关 键 词:鲐鱼  遗传结构  遗传多样性  AFLP
收稿时间:2010/9/29 0:00:00
修稿时间:2011/4/26 0:00:00

Population genetic structure of Pneumatophorus japonicus in the Taiwan Strait
ZHANG Liyan,SU Yongquan,WANG Hangjun and WANG Jun.Population genetic structure of Pneumatophorus japonicus in the Taiwan Strait[J].Acta Ecologica Sinica,2011,31(23):7097-7103.
Authors:ZHANG Liyan  SU Yongquan  WANG Hangjun and WANG Jun
Institution:College of Oceanography and Environmental Science, Xiamen University, Xiamen 361005, China;College of Oceanography and Environmental Science, Xiamen University, Xiamen 361005, China;College of Oceanography and Environmental Science, Xiamen University, Xiamen 361005, China;College of Oceanography and Environmental Science, Xiamen University, Xiamen 361005, China
Abstract:The chub mackerel Pneumatophorus japonicus distributes in Indo-Pacific Oceans and occurs along coastal waters of China, including the East China, South China and Yellow Seas. With the fishery collapses of the three top commercial marine fishes (the large yellow croaker Pseudosciaena crocea, the little yellow croaker P. polyactis and the largehead hairtail Trichiurus lepturus), the fishery of P. japonicus has become important since the 1980s. Based on the migration pattern, morphological and biological characteristics, and tagging experiment, two populations of P. japonicus were initially identified in the Taiwan Strait, i.e. the East China Sea population in eastern Fujian and population in Southern Fujian-Estern Guangdong.Knowledge on population structure is essential for developing fisheries management and conservation measures. In this study, specimens of P. japonicus were sampled from eastern and southern Fujian waters in 2009-2010, with total lengths of 204.7-300.2 mm (n =30) and 214.1-311.5 mm (n =30), respectively. Amplified fragment length polymorphism (AFLP) was used to analyze the genetic diversity and variation of the East China Sea and Southern Fujian-Estern Guangdong populations in the Taiwan Strait and its adjacent waters. AFLP bands were scored for presence (1) or absence (0) and transformed into 0/1 binary character matrix. AMOVA was performed in Arlequin 3.1. Number of polymorphic loci, Nei genetic diversity, Shannon genetic diversity index, genetic similarity and genetic distance between populations, coefficient of gene differentiations (G st), gene flow (Nm) and dominant gene frequency were conducted in POPGENE 1.31.A total of 497 loci ranging in size from 100 bp to 1000 bp were detected from 60 specimens of P. japonicus based on eight primer combinations, of which 343 were polymorphic; however, no population specific band was found. The number of bands per primer combination varied from 50 to 81 and the polymorphic bands per primer combination ranged from 60.00% to 94.29%. The proportion of polymorphic loci, the Nei genetic diversity and Shannon genetic diversity index had no significant difference (P >0.05) between the two populations with 57.75%, 0.1779 and 0.2725 in eastern Fujian waters, and 64.59%, 0.2123 and 0.3228 in southern Fujian waters, respectively. The G st value, Shannon genetic diversity index and AMOVA analysis showed that the genetic variation mainly existed among individuals within population. Nm showed the frequent gene flow between the two populations. Dominant gene frequency revealed that both populations had a similar genetic structure. This study reveals that the genetic diversity of the two initially proposed populations is at the same level. We propose that the stocks of P. japonicus in the Taiwan Strait belong to the same population. Further studies using co-dominant markers are needed for a better understanding of the population genetics of P. japonicus.The genetic diversity of P. japonicus in the Taiwan Strait is considerably higher than some commercially important marine fishes in coastal waters of China, such as the Hong Kong grouper Epinephelus akaara, Yellow drum Nibea albiflora, Barfin flounder Verasper moseri and Silver pomfret Pampus argenteus. Wide distribution and short reproductive cycle may contribute to high genetic diversity of P. japonicus. Annual migrations and larval drift in the ocean currents can explain the genetic homogeneity in the studied areas. Currently, the fishery of P. japonicus in southern Fujian waters remains stable; however, it shows a decline in eastern Fujian waters. Therefore, timely and effective management can ensure the sustainable use of P. japonicus wild stocks in China.
Keywords:Pneumatophorus japonicus  genetic structure  genetic diversity  AFLP
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