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Battling for Ribosomes: Translational Control at the Forefront of the Antiviral Response
Authors:Huy-Dung Hoang  Tyson E Graber  Tommy Alain
Institution:1. Department of Biochemistry, Microbiology and Immunology, Faculty of Medicine, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada;2. Children''s Hospital of Eastern Ontario Research Institute, University of Ottawa, Ottawa, Ontario K1H 8L1, Canada
Abstract:In the early stages of infection, gaining control of the cellular protein synthesis machinery including its ribosomes is the ultimate combat objective for a virus. To successfully replicate, viruses unequivocally need to usurp and redeploy this machinery for translation of their own mRNA. In response, the host triggers global shutdown of translation while paradoxically allowing swift synthesis of antiviral proteins as a strategy to limit collateral damage. This fundamental conflict at the level of translational control defines the outcome of infection. As part of this special issue on molecular mechanisms of early virus–host cell interactions, we review the current state of knowledge regarding translational control during viral infection with specific emphasis on protein kinase RNA-activated and mammalian target of rapamycin-mediated mechanisms. We also describe recent technological advances that will allow unprecedented insight into how viruses and host cells battle for ribosomes.
Keywords:4E-BP  eIF4E-binding protein  4EHP  eIF4E homologous protein  AHA  azidohomoalanine  BHV-1  bovine herpes virus type 1  BVDV  bovine diarrhea virus  CARS  coherent anti-stokes raman scattering  CHX  cycloheximide  CrPV  cricket paralysis virus  CXCL10  C-X-C chemokine motif ligand 10  dsRBM  dsRNA binding domain  dsRNA  double-stranded RNA  eEF  eukaryotic elongation factor  eEF2K  eEF2 kinase  eIF  eukaryotic initiation factor  EMCV  encephalomyocarditis virus  EBV  Epstein–Barr virus  ER  endoplasmic reticulum  eRF  eukaryotic release factor  FACS  fluorescence activated cell sorting  FMDV  foot-and-mouth disease virus  G3BP1  Ras-GTPase activating protein SH3 domain-binding protein 1  GAP  GTPase activating protein  GCN2  general control nonderepressible 2  GEF  guanosine exchange factor  GPCR  G protein-coupled receptor  HAV  hepatitis A virus  HCV  hepatitis C virus  HHT  homoharringtonine  HIV-1  -2  human immunodeficiency virus type 1  type 2  HPV  human papillomavirus  HRI  meme-regulated inhibitor  HRV2  human rhinovirus type 2  HSV-1  herpes simplex virus type 1  H/MCMV  human/mouse cytomegalovirus  IFIT  IFN-induced protein with tetracopeptide repeats  IFN  interferon  IRES  internal ribosome entry site  IRF  interferon regulatory factor  ISG  interferon stimulated gene  ISR  integrated stress response  ITAF  IRES trans-acting protein factor  KSHV  Kaposi's sarcoma-associated herpesvirus  LARP1  La-related protein 1  lncRNA  long non-coding RNA  LTM  lactimidomycin  M7G  7-methylguanosine  MAPK  mitogen-activated protein kinase  MEF  mouse embryonic fibroblast  i  initiator methionyl-tRNA  MNK  MAPK interacting protein kinase  mRNA  messenger RNA  mTORC1  mammalian target of rapamycin complex 1  mTORC2  mammalian target of rapamycin complex 2  MV  myxoma virus  NDV  Newcastle disease virus disease virus  NF-κB  nuclear factor kappa-light-chain-enhancer of activated B cells  PABP  poly-A binding protein  P-eIF2α  phospho-eIF2α  PERK  PKR-like ER kinase  PIP3  phosphatidylinositol (3  4  5)-triphosphate  PI3K  phosphoinositide 3-kinase  PKR  protein kinase RNA-activated  PP1  protein phosphatase 1  PV  poliovirus  PRR  pattern recognition receptor  RHEB  Ras homolog enriched in brain  RPM  ribopuromycylation  RPS6  ribosomal protein S6  rRNA  ribosomal RNA  RRL  rabbit reticulolysate  RSK  ribosomal protein S6 kinase  S6K  S6 kinase  SG  stress granule  SILAC  stable isotope labeling of amino acid in cell culture  SKAR  S6 kinase 1 Aly/REF-like target  ssRNA  single-stranded RNA  SV  Sindbis virus  TBEV  tick-borne encephalitis virus  TC  ternary complex  TE  translational efficiency  TIA1  T-cell internal antigen 1  TIAR  TIA1-related protein  TLR  toll-like receptor  TMEV  Theiler's encephalomyocarditis virus  TOP  terminal oligopyrimidine  tRNA  transfer RNA  TSC  tuberous sclerosis complex  uORF  upstream open reading frame  UTR  untranslated region  VSV  vesicular stomatitis virus  VV  vaccinia virus  WNV  West Nile virus  XIAP  X-linked inhibitor of apoptosis  Virus  mTOR  protein synthesis  stress granules  ribosome profiling
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