Storing biological sequence databases in relational form |
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| Authors: | Xie G DeMarco R Blevins R Wang Y |
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| Affiliation: | Department of Bioinformatics, Merck & Co., Inc., WP42-300, West Point, PA 19486, USA. |
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| Abstract: | SUMMARY: We have created a set of applications using Perl and Java in combination with XML technology to install biological sequence databases into an Oracle RDBMS. An easy-to-use interface using Java has been created for database query and other tools developed to integrate with our in-house bioinformatics applications. AVAILIBILITY: The database schema, DTD file, and source codes are available from the authors via email. CONTACT: guochun_ xie@merck. com |
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