Effect of oxygen deficiency on nitrogen assimilation and amino acid metabolism of soybean root segments

Plants submitted to O₂ deficiency present a series of biochemical modifications, affecting overall root metabolism. Here, the effect of hypoxia on the metabolic fate of ¹⁵N derived from ¹⁵NO₃ ^?, ¹⁵NO₂ ^? and ¹⁵NH₄ ⁺ in isolated soybean root segments was followed by gas chromatography–mass spectrometry, to provide a detailed analysis of nitrogen assimilation and amino acid biosynthesis under hypoxia. O₂ deficiency decreased the uptake of the nitrogen sources from the solution, as ratified by the lower ¹⁵NO₃ ^? and ¹⁵NH₄ ⁺ enrichment in the root segments. Moreover, analysis of endogenous NO₂ ^? and ¹⁵NH₄ ⁺ levels suggested a slower metabolism of these ions under hypoxia. Accordingly, regardless of the nitrogen source, hypoxia reduced total ¹⁵N incorporation into amino acids. Analysis of ¹⁵N enrichment patterns and amino acid levels suggest a redirecting of amino acid metabolism to alanine and γ-aminobutyric acid synthesis under hypoxia and a differential sensitivity of individual amino acid pathways to this stress. Moreover, the role of glutamine synthetase in nitrogen assimilation both under normoxia and hypoxia was ratified. In comparison with ¹⁵NH₄ ⁺, ¹⁵NO₂ ^? assimilation into amino acids was more strongly affected by hypoxia and NO₂ ^? accumulated in root segments during this stress, indicating that nitrite reductase may be an additional limiting step. NO₂ ^? accumulation was associated with a higher nitric oxide emission. ¹⁵NO₃ ^? led to much lower ¹⁵N incorporation in both O₂ conditions, probably due to the limited nitrate reductase activity of the root segments. Overall, the present work shows that profound alterations of root nitrogen metabolism occur during hypoxic stress.