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Structural bases for heme binding and diatomic ligand recognition in truncated hemoglobins
Authors:Milani Mario  Pesce Alessandra  Nardini Marco  Ouellet Hugues  Ouellet Yannick  Dewilde Sylvia  Bocedi Alessio  Ascenzi Paolo  Guertin Michel  Moens Luc  Friedman Joel M  Wittenberg Jonathan B  Bolognesi Martino
Institution:Institute Giannina Gaslini, Largo Giannina Gaslini 5, 16147 Genova, Italy.
Abstract:Truncated hemoglobins (trHbs) are low-molecular-weight oxygen-binding heme-proteins distributed in eubacteria, cyanobacteria, unicellular eukaryotes, and in higher plants, constituting a distinct group within the hemoglobin (Hb) superfamily. TrHbs display amino acid sequences 20-40 residues shorter than classical (non)vertebrate Hbs and myoglobins, to which they are scarcely related by sequence similarity. The trHb tertiary structure is based on a 2-on-2 alpha-helical sandwich, which represents a striking editing of the highly conserved 3-on-3 alpha-helical globin fold, achieved through deletion/truncation of alpha-helices and specific residue substitutions. Despite their 'minimal' polypeptide chain span, trHbs display an inner tunnel/cavity system held to support ligand diffusion to/from the heme distal pocket, accumulation of heme ligands within the protein matrix, and/or multiligand reactions. Moreover, trHbs bind and effectively stabilize the heme and recognize diatomic ligands (i.e., O2, CO, NO, and cyanide), albeit with varying thermodynamic and kinetic parameters. Here, structural bases for heme binding and diatomic ligand recognition by trHbs are reviewed.
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