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An activating amino acid substitution in the c-abl oncogene protein fails to produce a local conformational change
Authors:Paul W. Brandt-Rauf   Gary Bomzer   David Belford  Matthew R. Pincus
Affiliation:(1) Division of Environmental Sciences, Department of Medicine and Comprehensive Cancer Center, Columbia-Presbyterian Medical Center, 60 Haven Avenue, 10032 New York, New York;(2) Department of Chemistry, New York University, 4 Washington Place, 10003 New York, New York;(3) Department of Pathology, SUNY Health Sciences Center, 750 East Adams Street, 13210 Syracuse, New York
Abstract:Thebcr-abl chimeric gene of Philadelphia chromosome positive chronic myelogenous leukemias is only weakly transforming. This transformation activity is greatly enhanced by a Lys-for-Glu substitution at position 832 in the c-abl gene, as occurs in the highly transforming v-abl genes. It has been suggested that this mutation results in a significant structural change in the encoded protein product. Using conformational energy analysis, we have determined the allowed low-energy conformations for residues 828–836 of this protein with Lys and Glu at position 832. In both cases, the overwhelmingly preferred conformation for this region is a bend-helix motif. The helix terminates at residue 836, and there are no discernible differences in conformation between the Lys- and Glu-containing sequences. These results suggest that the activating amino acid substitution at position 832 in the c-abl protein product does not produce its effect via a local conformational change.
Keywords:Conformational energy  three-dimensional structure  amino acid substitution  c-abl oncogene  transformation
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