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Evidence for a second class of S-adenosylmethionine riboswitches and other regulatory RNA motifs in alpha-proteobacteria
Authors:Keith A Corbino  Jeffrey E Barrick  Jinsoo Lim  Rüdiger Welz  Brian J Tucker  Izabela Puskarz  Maumita Mandal  Noam D Rudnick and Ronald R Breaker
Institution:(1) Department of Molecular, Cellular and Developmental Biology, Yale University, P.O. Box 208103, New Haven, CT 06520-8103, USA;(2) Department of Molecular Biophysics and Biochemistry, Yale University, P.O. Box 208103, New Haven, CT 06520-8103, USA;(3) Department of Chemistry, Yale University, P.O. Box 208103, New Haven, CT 06520-8103, USA;(4) Department of Physics, University of California, Berkeley, CA 94720-7200, USA
Abstract:

Background  

Riboswitches are RNA elements in the 5' untranslated leaders of bacterial mRNAs that directly sense the levels of specific metabolites with a structurally conserved aptamer domain to regulate expression of downstream genes. Riboswitches are most common in the genomes of low GC Gram-positive bacteria (for example, Bacillus subtilis contains examples of all known riboswitches), and some riboswitch classes seem to be restricted to this group.
Keywords:
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