Effect of Cadmium Ion on alpha-Glucosidase: An Inhibition Kinetics and Molecular Dynamics Simulation Integration Study |
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Authors: | Tao Luo Jinhyuk Lee Zhi-Rong Lü Hang Mu Li-Mei Yue Yong-Doo Park Zhuo-Ming Ye |
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Institution: | 1.Department of Epidemiology, School of Public Health and Tropical Medicine, Guangdong Provincial Key Laboratory of Tropical Disease Research,Southern Medical University,Guangzhou,People’s Republic of China;2.Korean Bioinformation Center (KOBIC),Korea Research Institute of Bioscience and Biotechnology,Daejeon,Korea;3.Department of Nanobiotechnology and Bioinformatics,University of Sciences and Technology,Daejeon,Korea;4.Zhejiang Provincial Key Laboratory of Applied Enzymology,Yangtze Delta Region Institute of Tsinghua University,Jiaxing,People’s Republic of China |
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Abstract: | α-Glucosidase is a critical metabolic enzyme that produces glucose molecules by catalyzing carbohydrates. The aim of this study is to elucidate biological toxicity of Cd2+ based on α-glucosidase activity and conformational changes. We studied Cd2+-mediated inactivation as well as conformational modulation of α-glucosidase by using kinetics coupled with simulation of molecular dynamics. The enzyme was significantly inactivated by Cd2+ in a reversibly binding behavior, and Cd2+ binding induced a non-competitive type of inhibition reaction (the K i was calculated as 0.3863 ± 0.033 mM). Cd2+ also modulated regional denaturation of the active site pocket as well as overall partial tertiary structural change. In computational simulations using molecular dynamics, simulated introduction of Cd2+ induced in a depletion of secondary structure by docking Cd2+ near the saccharides degradation at the active site, suggesting that Cd2+ modulating enzyme denaturation. The present study elucidated that the binding of Cd2+ triggers conformational changes of α-glucosidase as well as inactivates catalytic function, and thus suggests an explanation of the deleterious effects of Cd2+ on α-glucosidase. |
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