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The crystal structure of a bacterial Sufu-like protein defines a novel group of bacterial proteins that are similar to the N-terminal domain of human Sufu
Authors:Debanu Das  Robert D Finn  Polat Abdubek  Tamara Astakhova  Herbert L Axelrod  Constantina Bakolitsa  Xiaohui Cai  Dennis Carlton  Connie Chen  Hsiu‐Ju Chiu  Michelle Chiu  Thomas Clayton  Marc C Deller  Lian Duan  Kyle Ellrott  Carol L Farr  Julie Feuerhelm  Joanna C Grant  Anna Grzechnik  Gye Won Han  Lukasz Jaroszewski  Kevin K Jin  Heath E Klock  Mark W Knuth  Piotr Kozbial  S Sri Krishna  Abhinav Kumar  Winnie W Lam  David Marciano  Mitchell D Miller  Andrew T Morse  Edward Nigoghossian  Amanda Nopakun  Linda Okach  Christina Puckett  Ron Reyes  Henry J Tien  Christine B Trame  Henry van den Bedem  Dana Weekes  Tiffany Wooten  Qingping Xu  Andrew Yeh  Jiadong Zhou  Keith O Hodgson  John Wooley  Marc‐André Elsliger  Ashley M Deacon  Adam Godzik  Scott A Lesley  Ian A Wilson
Institution:1. Joint Center for Structural Genomics, http://www.jcsg.org;2. Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, California 94025;3. Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton CB10 1SA, United Kingdom;4. Protein Sciences Department, Genomics Institute of the Novartis Research Foundation, San Diego, California 92121;5. Center for Research in Biological Systems, University of California, San Diego, La Jolla, California 92093;6. Program on Bioinformatics and Systems Biology, Sanford‐Burnham Medical Research Institute, La Jolla, California 92037;7. Department of Molecular Biology, The Scripps Research Institute, La Jolla, California 92037;8. Photon Science, SLAC National Accelerator Laboratory, Menlo Park, California 94025
Abstract:Sufu (Suppressor of Fused), a two‐domain protein, plays a critical role in regulating Hedgehog signaling and is conserved from flies to humans. A few bacterial Sufu‐like proteins have previously been identified based on sequence similarity to the N‐terminal domain of eukaryotic Sufu proteins, but none have been structurally or biochemically characterized and their function in bacteria is unknown. We have determined the crystal structure of a more distantly related Sufu‐like homolog, NGO1391 from Neisseria gonorrhoeae, at 1.4 Å resolution, which provides the first biophysical characterization of a bacterial Sufu‐like protein. The structure revealed a striking similarity to the N‐terminal domain of human Sufu (r.m.s.d. of 2.6 Å over 93% of the NGO1391 protein), despite an extremely low sequence identity of ~15%. Subsequent sequence analysis revealed that NGO1391 defines a new subset of smaller, Sufu‐like proteins that are present in ~200 bacterial species and has resulted in expansion of the SUFU (PF05076) family in Pfam.
Keywords:Neisseria gonorrhoeae  NGO1391  UniProt Q5F6Z8  Pfam PF05076  suppressor of fused  sufu‐like  structural genomics
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