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同源盒基因A10编码蛋白的靶调节基因的筛选与鉴定
引用本文:余州,张立斌,靳亚平,桂耀庭.同源盒基因A10编码蛋白的靶调节基因的筛选与鉴定[J].生物技术通讯,2008,19(6):820-822.
作者姓名:余州  张立斌  靳亚平  桂耀庭
作者单位:1. 西北农林科技大学,动物医学院,陕西,杨凌,712100;北京大学深圳医院,男性生殖与遗传重点实验室,广东,深圳,518036
2. 北京大学深圳医院,男性生殖与遗传重点实验室,广东,深圳,518036
3. 西北农林科技大学,动物医学院,陕西,杨凌,712100
基金项目:人事部留学人员科技活动项目择优资助项目 
摘    要:目的:筛选和鉴定同源盒基因A10编码蛋白(HOXA10)的靶调节基因。方法:以人子宫内膜细胞系AN3CA为实验对象,采用染色质免疫沉淀方法筛选HOXA10靶基因;采用平端克隆方法构建HOXA10靶基因库;采用DNA序列分析结合生物信息学方法鉴定HOXA10靶基因。结果:共获得含有HOXA10结合片段的克隆197个,选取插入片段大于100bp的质粒67个进行DNA序列分析,其中含有HOXA10结合序列TTAT的基因16个。结论:初步筛选出16个HOXA10候选靶基因,为进一步研究HOXA10的基因调节机理提供了新的思路。

关 键 词:同源盒基因A10  靶基因  染色质免疫沉淀技术

Screening and Identification of the Target Genes of HOXA10 Encoded by Homeobox Gene A10
YU Zhou,ZHANG Li-Bin,JIN Ya-Ping,GUI Yao-Ting.Screening and Identification of the Target Genes of HOXA10 Encoded by Homeobox Gene A10[J].Letters in Biotechnology,2008,19(6):820-822.
Authors:YU Zhou  ZHANG Li-Bin  JIN Ya-Ping  GUI Yao-Ting
Institution:YU Zhou, ZHANG Li-Bin, JIN Ya-Pin, GUI Yao-Ting( 1. College of Veterinary Medicine, Northwest A & F University, Yangling 712100; 2. Shenzhen Key Laboratory of Male Reproductive Medicine, Peking University Shenzhen Hospital, Shenzhen 518036; China)
Abstract:Objective: To screen and identify the target genes of HOXA10 encoded by homeobox gene A IO. Methods: Chromatin immunoprecipitation assay(ChiP) was used to screen the genes, which bound to HOXA10 in a human endometrial cell line, AN3CA. The fragments binding to HOXA10 were cloned. DNA sequencing and bioinformatical analysis were applied to identify the candidate of HOXA10 target genes. Results: 197 clones containing HOXA10 binding DNA frag- ments were identified by CHIP. 67 fragments larger than 100 bp were sequenced. 16 candidates containing HOXA10 target sequence TrAT were identified. Conclusion: 16 candidates of HOXA10 targeting genes were identified. The work in the future will be confiiming the binding by gel mobile shift and footprinting, as well as the biological significances of the binding.
Keywords:homeobox gene A 10  target genes  chromatin immunoprecipitation assay
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