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Functional constraint and small insertions and deletions in the ENCODE regions of the human genome
Authors:Taane G Clark  Toby Andrew  Gregory M Cooper  Elliott H Margulies  James C Mullikin  David J Balding
Institution:(1) Department of Epidemiology and Public Health, Imperial College, Norfolk Place, London, W2 1PG, UK;(2) Department of Genetics, Stanford University, Stanford, California 94305, USA;(3) National Human Genome Research Institute, National Institutes of Health, 9000 Rockville Pike, Bethesda, Maryland 20892, USA
Abstract:

Background  

We describe the distribution of indels in the 44 Encyclopedia of DNA Elements (ENCODE) regions (about 1% of the human genome) and evaluate the potential contributions of small insertion and deletion polymorphisms (indels) to human genetic variation. We relate indels to known genomic annotation features and measures of evolutionary constraint.
Keywords:
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