首页 | 本学科首页   官方微博 | 高级检索  
   检索      


Energy distribution and ion selectivity of the bacterial potassium channel
Authors:A V Dmitriev  I V Markov  V G Baryshnikov  V A Tverdislov
Institution:(1) Lipetsk State Pedagogical University, Lipetsk, 398020, Russia;(2) Physical Faculty, Moscow State University, Moscow, 119899, Russia
Abstract:The ion selectivity of the bacterial potassium channel KCSA is explained upon comparing the energy characteristics of the interaction of cations (Li+, Na+, K+) with atoms of the selectivity filter of the protein pore. Quantum-chemical calculations reveal a deeper potential well for potassium ions, which accounts for preferred K+ permeation. It is shown that the conventional methods with AMBER, CHARMM, OPLS force fields in standard parametrization as well as partial re-parametrization give incorrect estimates of ion energy distribution in the channel.
Keywords:bacterial potassium channel  ion selectivity  force fields  quantum-chemical calculations
本文献已被 SpringerLink 等数据库收录!
设为首页 | 免责声明 | 关于勤云 | 加入收藏

Copyright©北京勤云科技发展有限公司  京ICP备09084417号