Plastome of Saraca asoca (Detarioideae,Fabaceae): Annotation,comparison among subfamily and molecular typing |
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| Authors: | Mohammad Ajmal Ali Tapan Kumar Pan Arun Bahadur Gurung Mohammad Abul Farah Fahad Al-Hemaid Khalid Mashay Alanazi Meena Elangbam Joongku Lee Shankar Kumar Pandey M. Oliur Rahman Soo-Yong Kim |
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| Affiliation: | 1. Department of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia;2. University Department of Botany, Tilka Manjhi Bhagalpur University, Bhagalpur 812007, Bihar, India;3. Department of Basic Sciences and Social Sciences, North-Eastern Hill University, Shillong 793022, Meghalaya, India;4. Genetics Laboratory, Department of Zoology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia;5. Genetics Laboratory, Centre of Advanced Studies in Life Sciences, Manipur University, Canchipur 795 003, India;6. Department of Environment and Forest Resources, Chungnam National University, Daejeon 34134, Republic of Korea;7. Department of Botany, TNB College, Tilka Manjhi Bhagalpur University, Bhagalpur 812007, Bihar, India;8. Department of Botany, University of Dhaka, Dhaka 1000, Bangladesh;9. International Biological Material Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon 34141, Republic of Korea |
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| Abstract: | Saraca asoca (Roxb.) Willd. (subfamily Detarioideae, family Fabaceae) is a perennial evergreen sacred medicinal tree classified under ‘vulnerable’ by the IUCN. The chloroplast (cp) genome/plastome which follows uniparental inheritance contains many useful genetic information because of its conservative rate of evolution. The assembled cp genome of S. asoca which maps as a conserved circular structure revealed extensive rearrangement in gene organization, comprising total length 160,003 bp including LSC, SSC, IRa, and IRb, and GC content was 35.26%. Herein a set of rbcL and matK gene were established using molecular phylogenetic analyses for molecular typing of S. asoca. |
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| Keywords: | Plastome Detarioideae Fabaceae Molecular authentication Simple sequence repeat Genomic rearrangement |
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