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Preclinical Evaluation of a Novel TALEN Targeting CCR5 Confirms Efficacy and Safety in Conferring Resistance to HIV-1 Infection
Authors:Marianna Romito  Alexandre Juillerat  Yik Lim Kok  Markus Hildenbeutel  Manuel Rhiel  Geoffroy Andrieux  Johannes Geiger  Carsten Rudolph  Claudio Mussolino  Aymeric Duclert  Karin J. Metzner  Philippe Duchateau  Toni Cathomen  Tatjana I. Cornu
Affiliation:1. Institute for Transfusion Medicine and Gene Therapy, Center for Chronic Immunodeficiency, Medical Center—University of Freiburg, Freiburg, 79106 Germany

Faculty of Medicine, University of Freiburg, Freiburg, 79110 Germany;2. Cellectis, Inc., New York, NY, 10016 USA;3. Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, Zurich, 8091 Switzerland

Institute of Medical Virology, University of Zurich, Zurich, 8057 Switzerland;4. Faculty of Medicine, University of Freiburg, Freiburg, 79110 Germany

Institute of Medical Bioinformatics and Systems Medicine, Medical Center – University of Freiburg, Freiburg, 79110 Germany

German Cancer Consortium (DKTK), Freiburg, Germany and German Cancer Research Center (DKFZ), Heidelberg, 69120 Germany;5. ethris GmbH, Planegg, 81249 Germany;6. Cellectis S.A., Paris, 75013 France;7. Institute for Transfusion Medicine and Gene Therapy, Center for Chronic Immunodeficiency, Medical Center—University of Freiburg, Freiburg, 79106 Germany

Abstract:Therapies to treat patients infected with human immunodeficiency virus (HIV) aim at preventing viral replication but fail to eliminate the virus. Although transplantation of allogeneic CCR5Δ32 homozygous stem cell grafts provided a cure for a few patients, this approach is not considered a general therapeutic strategy because of potential side effects. Conversely, gene editing to disrupt the C-C chemokine receptor type 5 (CCR5) locus, which encodes the major HIV coreceptor, has shown to confer resistance to CCR5-tropic HIV strains. Here, an engineered transcription activator-like effector nuclease (TALEN) that enables efficient CCR5 editing in hematopoietic cells is presented. After transferring TALEN-encoding mRNA into primary CD4+ T cells, up to 89% of CCR5 alleles are disrupted. Genotyping confirms the genetic stability of the CCR5-edited cells, and genome-wide off-target analyses established the absence of relevant mutagenic events. When challenging the edited T cells with CCR5-tropic HIV, protection in a dose-dependent manner is observed. Functional assessments reveal no significant differences between edited and control cells in terms of proliferation and their ability to secrete cytokines upon exogenous stimuli. In conclusion, a highly active and specific TALEN to disrupt CCR5 is successfully engineered, paving the way for its clinical application in hematopoietic stem cell grafts.
Keywords:C-C chemokine receptor type 5 editing  CCR5 knockout  human immunodeficiency virus type 1  HIV cure  transcription activator-like effector nuclease
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