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Focus: A Multifaceted Battle Against Cancer: Approaches to Identifying Synthetic Lethal Interactions in Cancer
Authors:Jordan M. Thompson  Quy H. Nguyen  Manpreet Singh  Olga V. Razorenova
Affiliation:Molecular Biology and Biochemistry Department, University of California Irvine, Irvine, California
Abstract:Targeting synthetic lethal interactions is a promising new therapeutic approach to exploit specific changes that occur within cancer cells. Multiple approaches to investigate these interactions have been developed and successfully implemented, including chemical, siRNA, shRNA, and CRISPR library screens. Genome-wide computational approaches, such as DAISY, also have been successful in predicting synthetic lethal interactions from both cancer cell lines and patient samples. Each approach has its advantages and disadvantages that need to be considered depending on the cancer type and its molecular alterations. This review discusses these approaches and examines case studies that highlight their use.
Keywords:synthetic lethality   synthetic lethal interactions   drug discovery   drug screening assays   antitumor   cancer   neoplasms   library screens   siRNA screen   siRNA library   shRNA screen   shRNA library   CRISPR screen   CRISPR library   computational screen   DAISY
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