Circular genome visualization and exploration using CGView |
| |
Authors: | Stothard Paul Wishart David S |
| |
Institution: | Department of Biological Sciences and Computing Science, University of Alberta Edmonton, Alberta, Canada T6G 2E8. |
| |
Abstract: | SUMMARY: CGView (Circular Genome Viewer) is a Java application and library for generating high-quality, zoomable maps of circular genomes. It converts XML or tab-delimited input into a graphical map (PNG, JPG or Scalable Vector Graphics format), complete with sequence features, labels, legends and footnotes. In addition to the default full view map, the program can generate a series of hyperlinked maps showing expanded views. The linked maps can be explored using any Web browser, allowing rapid genome browsing and facilitating data sharing. AVAILABILITY: CGView (the standalone application, library or applet), sample input, sample maps and documentation can be obtained from http://wishart.biology.ualberta.ca/cgview/ CONTACT: david.wishart@ualberta.ca. |
| |
Keywords: | |
本文献已被 PubMed 等数据库收录! |
|