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A protease-activatable luminescent biosensor and reporter cell line for authentic SARS-CoV-2 infection
Authors:Pehun Pereyra Gerber  Lidia M Duncan  Edward JD Greenwood  Sara Marelli  Adi Naamati  Ana Teixeira-Silva  Thomas WM Crozier  Ildar Gabaev  Jun R Zhan  Thomas E Mulroney  Emily C Horner  Rainer Doffinger  Anne E Willis  James ED Thaventhiran  Anna V Protasio  Nicholas J Matheson
Abstract:Efforts to define serological correlates of protection against COVID-19 have been hampered by the lack of a simple, scalable, standardised assay for SARS-CoV-2 infection and antibody neutralisation. Plaque assays remain the gold standard, but are impractical for high-throughput screening. In this study, we show that expression of viral proteases may be used to quantitate infected cells. Our assays exploit the cleavage of specific oligopeptide linkers, leading to the activation of cell-based optical biosensors. First, we characterise these biosensors using recombinant SARS-CoV-2 proteases. Next, we confirm their ability to detect viral protease expression during replication of authentic virus. Finally, we generate reporter cells stably expressing an optimised luciferase-based biosensor, enabling viral infection to be measured within 24 h in a 96- or 384-well plate format, including variants of concern. We have therefore developed a luminescent SARS-CoV-2 reporter cell line, and demonstrated its utility for the relative quantitation of infectious virus and titration of neutralising antibodies.
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