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Data-independent Acquisition Improves Quantitative Cross-linking Mass Spectrometry
Affiliation:3. From the 3Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany;;4. 4Wellcome Centre for Cell Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, Scotland, United Kingdom;;5. 5Biognosys, 8952 Zürich-Schlieren, Switzerland
Abstract:
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  • Highlights
    • •Quantitative cross-linking mass spectrometry (QCLMS) was automated by Spectronaut.
    • •Data-independent acquisition (DIA) was adapted to QCLMS.
    • •Accuracy and precision of quantitation improves with DIA over DDA.
    • •QCLMS is now ready for use in complex samples.
    Keywords:Protein Cross-linking*  Label-free quantification  Mass Spectrometry  Quantification  Bioinformatics software  Data independent acquisition  Reproducibility  Spectronaut  Xi
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