Integration and Analysis of CPTAC Proteomics Data in the Context of Cancer Genomics in the cBioPortal
Institution:
3. 3Department of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016;4. 4Institute for Systems Genetics, New York University School of Medicine, New York, NY 10016;5. 5Sackler Institute of Graduate Biomedical Sciences, New York University School of Medicine, New York, NY 10016;6. 6Marie-Josée and Henry R. Kravis Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York, NY 10065
Abstract:
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Highlights
•Support for mass spectrometry-based proteomics in cBioPortal.
•User-friendly web interface, a web API, and an R client to query proteogenomic data.
•Integration of Clinical Proteomics Tumor Analysis Consortium data with cBioPortal.
