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Impact of the green tea ingredient epigallocatechin gallate and a short pentapeptide (Ile-Ile-Ala-Glu-Lys) on the structural organization of mixed micelles and the related uptake of cholesterol
Authors:Francesco Giangreco  Siegfried Höfinger  Evangelos Bakalis  Francesco Zerbetto
Institution:1. Department of Chemistry ”G. Ciamician” University of Bologna, via F. Selmi 2, I-40126 Bologna, Italy;2. Alfa Analisi srl, via Giovanni XXIII 7, I-73037 Poggiardo, Lecce, Italy;3. VSC Research Center, ZID, Vienna University of Technology, Wiedner Hauptstr. 8-10, A-1040 Vienna, Austria;4. Department of Physics, Michigan Technological University, 1400 Townsend Drive, Houghton, MI 49931-1295, USA
Abstract:

Background

High levels of blood cholesterol are conventionally linked to an increased risk of developing cardiovascular disease (Grundy, 1986). Here we examine the molecular mode of action of natural products with known cholesterol-lowering activity, such as for example the green tea ingredient epigallocatechin gallate and a short pentapeptide, Ile-Ile-Ala-Glu-Lys.

Methods

Molecular Dynamics simulations are used to gain insight into the formation process of mixed micelles and, correspondingly, how active agents epigallocatechin gallate and Ile-Ile-Ala-Glu-Lys could possibly interfere with it.

Results

Self-assembly of physiological micelles occurs on the order of 35–50?ns; most of the structural properties of mixed micelles are unaffected by epigallocatechin gallate or Ile-Ile-Ala-Glu-Lys which integrate into the micellar surface; the diffusive motion of constituting lipids palmitoyl-oleoyl-phosphatidylcholine and cholesterol is significantly down-regulated by both epigallocatechin gallate and Ile-Ile-Ala-Glu-Lys;

Conclusions

The molecular mode of action of natural compounds epigallocatechin gallate and Ile-Ile-Ala-Glu-Lys is a significant down-regulation of the diffusive motion of micellar lipids.

General significance

Natural compounds like the green tea ingredient epigallocatechin gallate and a short pentapeptide, Ile-Ile-Ala-Glu-Lys, lead to a significant down-regulation of the diffusive motion of micellar lipids thereby modulating cholesterol absorption into physiological micelles.
Keywords:Cholesterol  Mixed micelles  Epigallocatechin gallate  Pentapeptide IIAEK  Molecular Dynamics  Anomalous diffusion  EGCG  epigallocatechin gallate  IIAEK  short pentapeptide Ile-Ile-Ala-Glu-Lys  MD  Molecular Dynamics simulation  POPC  palmitoyl-oleoyl-phosphatidylcholine  CLT  cholate  COL  cholesterol  WAT  water  +  sodium ion  ?  chloride ion  TIP3P  a frequently used force field for water  LDL  low density lipoprotein  AMBER  popular program package and force field for biomolecular simulation  a particular force field  GAFF  general AMBER force field  RESP  restrained electrostatic potential  ANTECHAMBER  component of AMBER for the generation of new parameter sets  SANDER  component of AMBER for actual MD simulations  PTRAJ  component of AMBER for post-processing trajectories  GAUSSIAN09  popular program package for quantum chemistry  B3LYP/6-31?g*  frequently used density functional and basis set  HPOT  hydrophobic tails  HYPH  hydrophilic head groups  COM  center of mass  VMD  Visual Molecular Dynamics a popular program for visualization of biomolecular structure  MOLDEN  other program for the graphical visualization of chemical structures  TAMSD  time averaged mean square displacement  MIC  micelle  MIC_dilt  micelle diluted  NpT  constant number of particles constant pressure constant temperature ensemble  SHAKE  NVT  constant number of particles constant volume constant temperature ensemble  GNUPLOT  popular program to produce graphical charts from bare data files  SIMS  popular program for the computation of molecular surfaces
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