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Studies on substrate specificity of Jmjd2a-c histone demethylases
Authors:Ponnaluri V K Chaithanya  Vavilala Divya Teja  Mukherji Mridul
Institution:Division of Pharmaceutical Sciences, School of Pharmacy, University of Missouri-Kansas City, MO 64108-2718, USA
Abstract:Jumonji domain containing iron (II), 2-oxoglutarate (2OG)-dependent dioxygenases from Jmjd2 family demethylate trimethylated histone3-lysine 9 (H3-K9me3), and also H3-K9me2 and H3-K36me3, albeit at lower rates. Recently, we have identified the first non-histone substrates of JmjD2 demethylases. Here, we studied the substrate specificity of Jmjd2a-c demethylases using site-directed mutagenesis and novel non-histone substrates. We identified preference of Arg at −1 position and a smaller amino acid at −2 position using both singly and doubly mutated peptide substrates by Jmjd2a-c demethylases. Our results also identified similarities in substrate selectivity by H3-K9 methyltransferase, G9a and Jmjd2 demethylases despite their distinct reaction mechanisms.
Keywords:Abbreviations: Jmjd2  Jumonji domain-2  KDM  lysine demethylase  2OG  2-oxoglutarate  SET  Su(var)3-9  enhancer-of-zeste  trithorax domain  WIZ  widely interspaced zinc finger motifs protein  ACINUS  apoptotic chromatin condensation inducer in nucleus 1  Dnmt1  DNA methyltransferase 1  KLF12  Kruppel like factor 12  HDAC1  histone deacetylase 1  PKMT  protein lysine methyltransferase  DNMT1  DNA methyltransferase 1
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