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α-Helical coiled-coil oligomerization domains in extracellular proteins
Authors:Richard A Kammerer
Abstract:Subunit oligomerization of many proteins is mediated by α-helical coiled-coil domains. 3,4-Hydrophobic heptad repeat sequences, the characteristic feature of the coiled-coil protein folding motif, have been found in a wide variety of gene products including cytoskeletal, nuclear, muscle, cell surface, extracellular, plasma, bacterial, and viral proteins. Whereas the majority of coiled-coil structures is represented by intracellular α-helical bundles that contain two polypeptide chains, examples of extracellular coiled-coil proteins are fewer in number. Most proteins located in the extracellular space form three-stranded α-helical assemblies. Recently, five-stranded coiled coils have been identified in thrombospondins 3 and 4 in cartilage oligomeric matrix protein, and the formation of a heterotetramer has been observed in in vitro studies with the recombinant asialoglycoprotein receptor oligomerization domain. Coiled-coil domains in laminins and probably also in tenascins and thrombospondins are responsible for the formation of tissue-specific isoforms by selective oligomerization of different polypeptide chains.
Keywords:α  -helical coiled-coil oligomerization domain  amphipatic α  -helix  heptad repeat  hydrophobic channel  isoforms  knobs-into-holes packing  pentamer  trimer  SP-D-lung surfactant protein D  CD-circular dichroism  NMR-nuclear magnetic resonance
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