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Unlocking the potential of metagenomics through replicated experimental design
Authors:Knight Rob  Jansson Janet  Field Dawn  Fierer Noah  Desai Narayan  Fuhrman Jed A  Hugenholtz Phil  van der Lelie Daniel  Meyer Folker  Stevens Rick  Bailey Mark J  Gordon Jeffrey I  Kowalchuk George A  Gilbert Jack A
Affiliation:Howard Hughes Medical Institute and Department of Chemistry & Biochemistry, University of Colorado at Boulder, Boulder, Colorado, USA. rob.knight@colorado.edu
Abstract:Metagenomics holds enormous promise for discovering novel enzymes and organisms that are biomarkers or drivers of processes relevant to disease, industry and the environment. In the past two years, we have seen a paradigm shift in metagenomics to the application of cross-sectional and longitudinal studies enabled by advances in DNA sequencing and high-performance computing. These technologies now make it possible to broadly assess microbial diversity and function, allowing systematic investigation of the largely unexplored frontier of microbial life. To achieve this aim, the global scientific community must collaborate and agree upon common objectives and data standards to enable comparative research across the Earth's microbiome. Improvements in comparability of data will facilitate the study of biotechnologically relevant processes, such as bioprospecting for new glycoside hydrolases or identifying novel energy sources.
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