Bread matters: a national initiative to profile the genetic diversity of Australian wheat |
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Authors: | Edwards David Wilcox Stephen Barrero Roberto A Fleury Delphine Cavanagh Colin R Forrest Kerrie L Hayden Matthew J Moolhuijzen Paula Keeble-Gagnère Gabriel Bellgard Matthew I Lorenc Michał T Shang Catherine A Baumann Ute Taylor Jennifer M Morell Matthew K Langridge Peter Appels Rudi Fitzgerald Anna |
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Affiliation: | Australian Centre for Plant Functional Genomics and University of Queensland, St. Lucia, Qld, Australia. |
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Abstract: | The large and complex genome of wheat makes genetic and genomic analysis in this important species both expensive and resource intensive. The application of next-generation sequencing technologies is particularly resource intensive, with at least 17?Gbp of sequence data required to obtain minimal (1×) coverage of the genome. A similar volume of data would represent almost 40× coverage of the rice genome. Progress can be made through the establishment of consortia to produce shared genomic resources. Australian wheat genome researchers, working with Bioplatforms Australia, have collaborated in a national initiative to establish a genetic diversity dataset representing Australian wheat germplasm based on whole genome next-generation sequencing data. Here, we describe the establishment and validation of this resource which can provide a model for broader international initiatives for the analysis of large and complex genomes. |
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