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Bread matters: a national initiative to profile the genetic diversity of Australian wheat
Authors:Edwards David  Wilcox Stephen  Barrero Roberto A  Fleury Delphine  Cavanagh Colin R  Forrest Kerrie L  Hayden Matthew J  Moolhuijzen Paula  Keeble-Gagnère Gabriel  Bellgard Matthew I  Lorenc Michał T  Shang Catherine A  Baumann Ute  Taylor Jennifer M  Morell Matthew K  Langridge Peter  Appels Rudi  Fitzgerald Anna
Affiliation:Australian Centre for Plant Functional Genomics and University of Queensland, St. Lucia, Qld, Australia.
Abstract:The large and complex genome of wheat makes genetic and genomic analysis in this important species both expensive and resource intensive. The application of next-generation sequencing technologies is particularly resource intensive, with at least 17?Gbp of sequence data required to obtain minimal (1×) coverage of the genome. A similar volume of data would represent almost 40× coverage of the rice genome. Progress can be made through the establishment of consortia to produce shared genomic resources. Australian wheat genome researchers, working with Bioplatforms Australia, have collaborated in a national initiative to establish a genetic diversity dataset representing Australian wheat germplasm based on whole genome next-generation sequencing data. Here, we describe the establishment and validation of this resource which can provide a model for broader international initiatives for the analysis of large and complex genomes.
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