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拟南芥黄心突变体yh基因的图位克隆及分析
引用本文:郝亚琦,宗秀梅,任 潘,付爱根. 拟南芥黄心突变体yh基因的图位克隆及分析[J]. 西北植物学报, 2021, 41(10): 1621-1626
作者姓名:郝亚琦  宗秀梅  任 潘  付爱根
作者单位:(教育部西部资源生物与现代生物技术教育部重点实验室,陕西省生物技术与生化工程重点实验室,西北大学 生命科学学院, 西安 710069)
基金项目:国家自然科学基金青年基金(31300204);
摘    要:在研究光合作用相关基因的过程中,获得了一个叶片为黄心(yellow heart,yh)的突变株,与野生型拟南芥(Col 0)相比,其新生叶片发黄,突变表型由隐性单基因控制。采用图位克隆及其精细定位技术,将yh突变基因定位在1号染色体的INS1_55_342与INS1_56_34区间,物理距离约为676 kb。通过测序得知yhAt1g64790第44个内含子剪接处有4个碱基的缺失,导致内含子剪切位点的变化。RT PCR分析显示,该基因表达降低,是At1g64790基因的一个新等位突变。研究表明,yh突变体与叶绿体的发育相关,可为进一步探究植物叶绿体和叶片发育机制提供新的遗传材料。

关 键 词:图位克隆;内含子剪接;叶色;叶发育

Map based Cloning and Analysis of the yh Gene in Arabidopsis thaliana Yellow Heart Mutant
HAO Yaqi,ZONG Xiumei,REN Pan,FU Aigen. Map based Cloning and Analysis of the yh Gene in Arabidopsis thaliana Yellow Heart Mutant[J]. Acta Botanica Boreali-Occidentalia Sinica, 2021, 41(10): 1621-1626
Authors:HAO Yaqi  ZONG Xiumei  REN Pan  FU Aigen
Abstract:In the process of investigating the photosynthesis related genes, we obtained a recessive Arabidopsis thaliana mutant, yellow heart (yh). Compared with the wild type (Col 0) A. thaliana, yh mutant appeared a yellow heart phenotype in new leaves. With map based cloning strategy, the mutant gene yh was precisely mapped into the 676 kb chromosome interval between the molecular markers INS1_55_342 and INS1_56_34 on chromosome 1. The yh mutant has a 4 base deletion at the splice junction of the 44th intron, which result in a change in the splice site of the intron. RT PCR results have indicated that the expression of yh gene is knock down, and yh mutant is indeed a new allelic mutation in gene At1g64790. Based on study above, yh mutant may provide a new genetic material to explore the chloroplast and leaf development mechanisms.
Keywords:map based cloning   intron splicing   leaf color   leaf development
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