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Quantum-mechanical kinetic study of the primary reaction of the photochemical cycle of Halobacterium halobium
Authors:A D Gochev  S G Christov
Institution:(1) Department of Biophysics, Institute of Nuclear Research and Nuclear Energy, Bulgarian Academy of Sciences, BG-1113 Sofia, Bulgaria;(2) Institute of Physical Chemistry, Bulgarian Academy of Sciences, BG-1000 Sofia, Bulgaria
Abstract:A two-frequency oscillator model for the primary photochemical reaction bacteriorhodopsin rarr batho-bacteriorhodopsin (K610) is proposed. According to this model two conformational changes in the reaction are considered to take place: the first one is a distortion of the retinal in the bacteriorhodopsin active site and the second one is a conformational transition of the bacterioopsin, affecting the native structure hydrogen bonds. On the basis of this model the temperature dependences of the rate constants for normal and deuterated reactants are calculated in good agreement with the available experimental data. The relations of the reaction considered to the primary photochemical reaction of vision are discussed.
Keywords:Bacteriorhodopsin  Rhodopsin  Quantum mechanics  Reaction kinetics
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