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rDNA targeted oligonucleotide primers for the identification of pathogenic yeasts in a polymerase chain reaction
Authors:Jack W Fell
Institution:(1) Rosenstiel School of Marine and Atmospheric Science, University of Miami, 4600 Rickenbacker Causeway, 33149 Key Biscayne, Florida, USA
Abstract:Summary Species-specific oligonucleotide primers were designed for PCR identification of the basidiomycetous yeastsCryptococcus neoformans, Trichosporon cutaneum andRhodotorula mucilaginosa. The procedure uses standard PCR components including DNA from the test species and three primers: two universal external (upstream and downstream) limiting primers and a species-specific internal primer. Species identification requires the formation of a species-specific rDNA nucleotide segment that is significantly smaller (sim200 bp) than a non-target segment (sim600 bp). The procedure can be used to identify yeasts from single and mixed populations.This paper is dedicated to Professor Herman Jan Phaff in honor of his 50 years of active research which still continues.
Keywords:Cryptococcus neoformans  Rhodotorula mucilaginosa  Trichosporon cutaneum  Basidiomycetes  Molecular taxonomy  Polymerase chain reaction
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