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Nucleotide sequence of Rous sarcoma virus RNA at the initiation site of DNA synthesis: The 102nd nucleotide is U.
Authors:J M Coffin  W A Haseltine
Institution:1. Department of Molecular Biology and Microbiology and Cancer Research Center Tufts University School of Medicine Boston, Mass. 02111, U.S.A.;2. Sidney Farber Cancer Center Harvard Medical School 35 Binney St, Boston, Mass. 02115, U.S.A.
Abstract:The T1 oligonucleotide in the genome Rous sarcoma virus (RSV) that corresponds to the initiation site of DNA synthesis in vitro was identified by hybridization of genome RNA with RSV strong stop DNA (the initial 101-nucleotide long fragment synthesized in endogenous reactions) and partially sequenced. The sequence of (C2, U2) A-U-U-U-G found corresponds to the d(A-A-T-G-A-A-G) sequence at the 5′ end of the DNA product plus the CA-OH sequence at the 3′ end of the tRNATrp primer. Therefore the nucleotide opposite the terminal A of the primer is the complementary U. Furthermore, no internal repetition of more than 30 nucleotides of the 5′ sequence could be detected.
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