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Plant microbiota modified by plant domestication
Institution:1. Centro de Ciencias Genómicas, UNAM, Cuernavaca, Mor, Mexico;2. Laboratorio de Ecología Microbiana, Departamento de Biología, Facultad de Ciencias, Universidad Nacional Agraria La Molina, Lima, Peru;1. Dept. of Computer Science, Modeling, Electronics and System Engineering, University of Calabria, Rende, Italy;2. Dept. of Electrical Engineering, Bar-Ilan University, Ramat-Gan, Israel;1. Institute of Biology, University of Neuchâtel, Rue Emile-Argand 11, 2000 Neuchâtel, Switzerland;2. Department of Biology, Edmonds Community College, Lynnwood, WA, USA;3. Departamento de Ecologia y Recursos Naturales, Facultad de Ciencias, Universidad Nacional Autonoma de Mexico (UNAM), Ave. Universidad 3000, CP 04510, Mexico City, Mexico;1. Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Morelos 62210, Mexico;2. Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos 62210, Mexico;3. Instituto de Biología, Universidad Nacional Autónoma de México, México D.F. 04510, Mexico;1. Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany;2. Department of Algorithmic Bioinformatics, Heinrich Heine University Duesseldorf, 40225 Duesseldorf, Germany;3. Cluster of Excellence on Plant Sciences (CEPLAS), Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany;4. Division of Plant Sciences, College of Life Sciences, University of Dundee at The James Hutton Institute, Invergowrie, Dundee DD2 5DA, Scotland, UK;5. Computational Biology of Infection Research, Helmholtz Center for Infection Research, 38124 Braunschweig, Germany
Abstract:Human life became largely dependent on agricultural products after distinct crop-domestication events occurred around 10,000 years ago in different geographical sites. Domestication selected suitable plants for human agricultural practices with unexpected consequences on plant microbiota, which has notable effects on plant growth and health. Among other traits, domestication has changed root architecture, exudation, or defense responses that could have modified plant microbiota. Here we present the comparison of reported data on the microbiota from widely consumed cereals and legumes and their ancestors showing that different bacteria were found in domesticated and wild plant microbiomes in some cases. Considering the large variability in plant microbiota, adequate sampling efforts and function-based approaches are needed to further support differences between the microbiota from wild and domesticated plants. The study of wild plant microbiomes could provide a valuable resource of unexploited beneficial bacteria for crops.
Keywords:Crops  Rhizosphere  Endophytes  Nitrogen fixation  Exudates
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