Vibrio taketomensis sp. nov. by genome taxonomy |
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| Affiliation: | 1. Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University, Hakodate, 3-1-1 Minato-cho, Hakodate, Hokkaido, 041-8611, Japan;2. Institute of Biology, Federal University of Bahia, Salvador, Brazil;3. National Institute of Science and Technology in Interdisciplinary and Transdisciplinary Studies in Ecology and Evolution (INCT IN-TREE), Brazil;4. Institute of Biology and SAGE-COPPE, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil;5. CIAD, AC Mazatlan Unit for Aquaculture and Environmental Management, Mazatlán, México;1. Universidade Federal do Pará (UFPA), Instituto de Estudos Costeiros, Bragança, CEP, PA, 68600-000;2. Universidade de São Paulo (USP), Instituto Oceanográfico, São Paulo, CEP, SP, 05508-120, Brazil;3. Universidade Federal da Paraíba (UFPB), Rio Tinto, CEP, PB, 58297-000, Brazil;4. Universidade Federal do Rio de Janeiro (UFRJ), Laboratório de Microbiologia, Instituto de Biologia e SAGE-COPPE. Rio de Janeiro, CEP, RJ, 21941-599, Brazil;1. Universidad de Málaga, Departamento de Microbiología, Facultad de Ciencias, 29071 Málaga, Spain;2. IFAPA Centro El Toruño, Junta de Andalucía, Puerto de Santa María, 11500 Cádiz, Spain;3. Departamento de Microbiología y Ecología, and Colección Española de Cultivos Tipo (CECT), Universidad de Valencia, Valencia, Spain;1. Departamento de Microbiología y Parasitología. CIBUS-Facultad de Biología. Universidad de Santiago de Compostela, 15782, Santiago de Compostela, Spain;2. Laboratorio de Patología de Organismos Acuáticos y Biotecnología Acuícola, Facultad de Ciencias Biológicas, Universidad Andrés Bello, Viña del Mar, Chile;3. Interdisciplinary Center for Aquaculture Research (INCAR), O’Higgins 1695, Concepción. Chile;4. Centro de Investigación Marina de Quintay (CIMARQ), Valparaíso, Chile |
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| Abstract: | Two novel strains C4III282T and C4III291 were isolated from seawater collected a site off the Taketomi coral reef. Phylogenetic analysis based on the 16S rRNA sequences revealed that the two strains belong to the genus Vibrio. MLSA using eight protein-coding genes (ftsZ, gapA, gyrB, mreB, pyrH, recA, rpoA, and topA) showed that C4III282T and C4III291 are closely related to the members of the Ponticus clade, namely Vibrio panuliri JCM 19500T, Vibrio ponticus DSM 16217T, and “Vibrio rhodolitus” G98. ANI and in silico DDH values with members of the Ponticus clade were 77.6-78.7% and 22.2-23.1, respectively. The name Vibrio taketomensis sp. nov. is proposed with C4III282T (CAIM 1928T = DSM 106943T = JCM 33434T) as the type strain. |
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| Keywords: | Taxonomy Ponticus clade Coral reef Seawater |
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