Mutational hotspots in the TP53 gene and, possibly, other tumor suppressors evolve by positive selection |
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Authors: | Galina V Glazko Vladimir N Babenko Eugene V Koonin Igor B Rogozin |
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Institution: | (1) Department of Biostatistics and Computational Biology, University of Rochester Medical Center, 601 Elmwood Avenue, Rochester, NY 14642, USA;(2) National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA |
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Abstract: | Background The mutation spectra of the TP53 gene and other tumor suppressors contain multiple hotspots, i.e., sites of non-random, frequent mutation in tumors and/or
the germline. The origin of the hotspots remains unclear, the general view being that they represent highly mutable nucleotide
contexts which likely reflect effects of different endogenous and exogenous factors shaping the mutation process in specific
tissues. The origin of hotspots is of major importance because it has been suggested that mutable contexts could be used to
infer mechanisms of mutagenesis contributing to tumorigenesis. |
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Keywords: | |
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