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SRM targeted proteomics in search for biomarkers of HCV-induced progression of fibrosis to cirrhosis in HALT-C patients
Authors:Qin Shizhen  Zhou Yong  Lok Anna S  Tsodikov Alex  Yan Xiaowei  Gray Li  Yuan Min  Moritz Robert L  Galas David  Omenn Gilbert S  Hood Leroy
Institution:Institute for Systems Biology, Seattle, Washington 98109, USA.
Abstract:The current gold standard for diagnosis of hepatic fibrosis and cirrhosis is the traditional invasive liver biopsy. It is desirable to assess hepatic fibrosis with noninvasive means. Targeted proteomic techniques allow an unbiased assessment of proteins and might be useful to identify proteins related to hepatic fibrosis. We utilized selected reaction monitoring (SRM) targeted proteomics combined with an organ-specific blood protein strategy to identify and quantify 38 liver-specific proteins. A combination of protein C and retinol-binding protein 4 in serum gave promising preliminary results as candidate biomarkers to distinguish patients at different stages of hepatic fibrosis due to chronic infection with hepatitis C virus (HCV). Also, alpha-1-B glycoprotein, complement factor H and insulin-like growth factor binding protein acid labile subunit performed well in distinguishing patients from healthy controls.
Keywords:Biomedicine/Fibrosis  Hepatitis C  Liver‐specific blood biomarkers  Selected reaction monitoring  Quantitation
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