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Impacts of maize hybrids with different nitrogen use efficiency on root-associated microbiota based on distinct rhizosphere soil metabolites
Authors:Keke Li  La Chen  Wenjun Shi  Conghui Hu  Ye Sha  Guozhong Feng  Entao Wang  Wenxin Chen  Xinhua Sui  Guohua Mi
Institution:1. Key Laboratory of Soil Microbiology, Ministry of Agriculture, College of Biological Sciences, China Agricultural University, Beijing, China

Contribution: Conceptualization (lead), Data curation (lead), Formal analysis (lead), ​Investigation (lead), Methodology (lead), Project administration (lead), Software (lead), Supervision (lead), Validation (lead), Visualization (lead), Writing - original draft (lead), Writing - review & editing (lead);2. Key Laboratory of Soil Microbiology, Ministry of Agriculture, College of Biological Sciences, China Agricultural University, Beijing, China

Contribution: Conceptualization (lead), Data curation (supporting), Formal analysis (supporting), ​Investigation (supporting), Methodology (supporting), Project administration (supporting), Software (supporting), Supervision (supporting), Visualization (supporting);3. Key Laboratory of Plant-Soil Interactions, Ministry of Education, College of Resources and Environmental Sciences, China Agricultural University, Beijing, China

Contribution: ​Investigation (supporting), Methodology (supporting);4. College of Resources and Environmental Science, Jilin Agricultural University, Changchun, China

Key Laboratory of Soil Resource Sustainable Utilization for Jilin Province Commodity Grain Bases, Changchun, China

Contribution: ​Investigation (supporting), Methodology (supporting);5. Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional, Mexico City, Mexico

Contribution: Writing - review & editing (supporting);6. Deceased.

Contribution: Resources (lead);7. Key Laboratory of Soil Microbiology, Ministry of Agriculture, College of Biological Sciences, China Agricultural University, Beijing, China;8. Key Laboratory of Plant-Soil Interactions, Ministry of Education, College of Resources and Environmental Sciences, China Agricultural University, Beijing, China

Abstract:Plant genotypes shape root-associated microbiota that affect plant nutrient acquisition and productivity. It is unclear how maize hybrids modify root-associated microbiota and their functions and relationship with nitrogen use efficiency (NUE) by regulating rhizosphere soil metabolites. Here, two N-efficient (NE) (ZD958, DMY3) and two N-inefficient (NIE) maize hybrids (YD9953, LY99) were used to investigate this issue under low N (60 kg N ha−1, LN) and high N (180 kg N ha−1, HN) field conditions. NE hybrids had higher yield than NIE hybrids under LN but not HN. NE and NIE hybrids recruited only distinct root-associated bacterial microbiota in LN. The bacterial network stability was stronger in NE than NIE hybrids. Compared with NIE hybrids, NE hybrids recruited more bacterial taxa that have been described as plant growth-promoting rhizobacteria (PGPR), and less related to denitrification and N competition; this resulted in low N2O emission and high rhizosphere NO3-N accumulation. NE and NIE hybrids had distinct rhizosphere soil metabolite patterns, and their specific metabolites were closely related to microbiota and specific genera under LN. Our findings reveal the relationships among plant NUE, rhizosphere soil metabolites, root-associated microbiota, and soil nutrient cycling, and this information is informative for breeding NE crops.
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