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Ontology-oriented retrieval of putative microRNAs in Vitis vinifera via GrapeMiRNA: a web database of de novo predicted grape microRNAs |
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| Authors: | Barbara Lazzari Andrea Caprera Alessandro Cestaro Ivan Merelli Marcello Del Corvo Paolo Fontana Luciano Milanesi Riccardo Velasco Alessandra Stella |
| Affiliation: | (1) Technology Park Lodi, Localit? Cascina Codazza, Via Einstein, 26900, Lodi, Italy;(2) IASMA Research Center, Via E. Mach 1, 38010 San Michele all'Adige (TN), Italy;(3) Institute for Biomedical Technologies (CNR), via Fratelli Cervi 93, 20090 Segrate (MI), Italy;(4) Institute of Agricultural Biology and Biotechnology (CNR), via Bassini 15, 20133 Milan, Italy |
| Abstract: | BackgroundTwo complete genome sequences are available for Vitis vinifera Pinot noir. Based on the sequence and gene predictions produced by the IASMA, we performed an in silico detection of putative microRNA genes and of their targets, and collected the most reliable microRNA predictions in a web database. The application is available at . |
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