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Machine learning helps identifying volume-confounding effects in radiomics
Institution:1. Department of Radiation Oncology (MAASTRO), GROW School for Oncology and Developmental Biology, Maastricht University Medical Centre+, Maastricht, The Netherlands;2. Radiation Medicine Program, Princess Margaret Cancer Centre, Toronto, Canada;3. Department of Radiation Oncology, Radboudumc, Nijmegen, The Netherlands
Abstract:PurposeHighlighting the risk of biases in radiomics-based models will help improve their quality and increase usage as decision support systems in the clinic. In this study we use machine learning-based methods to identify the presence of volume-confounding effects in radiomics features.Methods841 radiomics features were extracted from two retrospective publicly available datasets of lung and head neck cancers using open source software. Unsupervised hierarchical clustering and principal component analysis (PCA) identified relations between radiomics and clinical outcomes (overall survival). Bootstrapping techniques with logistic regression verified features’ prognostic power and robustness.ResultsOver 80% of the features had large pairwise correlations. Nearly 30% of the features presented strong correlations with tumor volume. Using volume-independent features for clustering and PCA did not allow risk stratification of patients. Clinical predictors outperformed radiomics features in bootstrapping and logistic regression.ConclusionsThe adoption of safeguards in radiomics is imperative to improve the quality of radiomics studies. We proposed machine learning (ML) – based methods for robust radiomics signatures development.
Keywords:Radiomics  Machine learning  Predictions  Lung  Head and neck
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