Simplified methods for monitoring petroleum‐contaminated ground water and soil vapor

Portable meters and simplified gas Chromatographic (GC) techniques were investigated for monitoring volatile hydrocarbon (HC), CO₂, and O₂, concentrations in groundwater, exhaust gases, and soil vapor during in situ remediation using soil vapor extraction (SVE) and air sparging (AS). Results of groundwater samples analyzed in‐house using a headspace technique compared well to split samples analyzed by a certified analytical laboratory (r² = 0.94). SVE exhaust gas HC and CO₂ concentrations measured using a GT201 portable HC/O₂ meter and a RA‐411A meter (GasTech), respectively, were highly correlated with in‐house laboratory GC analyses (r² = 0.91). O₂ concentrations fell in a small range and meter analyses were not well correlated with laboratory analyses. Results of soil gas monitoring were not as well correlated as those for exhaust gases for HC, CO₂, or O₂, perhaps due to environmental conditions such as changes in relative humidity or the wider range of soil gas values. Overall, the meters were good indicators of vapor contamination, they greatly simplified estimates of total HC mass removal, and they allowed estimates of the biological contribution to contaminant removal during the remediation process.     

Canopy structure of tropical and sub-tropical rain forests in relation to conifer dominance analysed with a portable LIDAR system

Background and Aims

Globally, conifer dominance is restricted to nutient-poor habitats in colder, drier or waterlogged environments, probably due to competition with angiosperms. Analysis of canopy structure is important for understanding the mechanism of plant coexistence in relation to competition for light. Most conifers are shade intolerant, and often have narrow, deep, conical crowns. In this study it is predicted that conifer-admixed forests have less distinct upper canopies and more undulating canopy surfaces than angiosperm-dominated forests.

Methods

By using a ground-based, portable light detection and ranging (LIDAR) system, canopy structure was quantified for old-growth evergreen rainforests with varying dominance of conifers along altitudinal gradients (200–3100 m a.s.l.) on tropical and sub-tropical mountains (Mount Kinabalu, Malaysian Borneo and Yakushima Island, Japan) that have different conifer floras.

Key Results

Conifers dominated at higher elevations on both mountains (Podocarpaceae and Araucariaceae on Kinabalu and Cupressaceae and Pinaceae on Yakushima), but conifer dominance also varied with soil/substrate conditions on Kinabalu. Conifer dominance was associated with the existence of large-diameter conifers. Forests with higher conifer dominance showed a canopy height profile (CHP) more skewed towards the understorey on both Kinabalu and Yakushima. In contrast, angiosperm-dominated forests had a CHP skewed towards upper canopy, except for lowland dipterocarp forests and a sub-alpine scrub dominated by small-leaved Leptospermum recurvum (Myrtaceae) on Kinabalu. Forests with a less dense upper canopy had more undulating outer canopy surfaces. Mixed conifer–angiosperm forests on Yakushima and dipterocarp forests on Kinabalu showed similar canopy structures.

Conclusions

The results generally supported the prediction, suggesting that lower growth of angiosperm trees (except L. recurvum on Kinabalu) in cold and nutrient-poor environments results in a sparser upper canopy, which allows shade-intolerant conifers to co-occur with angiosperm trees either as emergents or as codominants in the open canopy.     

Reduction of molecular gas diffusion through gaskets in leaf gas exchange cuvettes by leaf‐mediated pores

There is an ongoing debate on how to correct leaf gas exchange measurements for the unavoidable diffusion leakage that occurs when measurements are done in non‐ambient CO₂ concentrations. In this study, we present a theory on how the CO₂ diffusion gradient over the gasket is affected by leaf‐mediated pores (LMP) and how LMP reduce diffusive exchange across the gaskets. Recent discussions have so far neglected the processes in the quasi‐laminar boundary layer around the gasket. Counter intuitively, LMP reduce the leakage through gaskets, which can be explained by assuming that the boundary layer at the exterior of the cuvette is enriched with air from the inside of the cuvette. The effect can thus be reduced by reducing the boundary layer thickness. The theory clarifies conflicting results from earlier studies. We developed leaf adaptor frames that eliminate LMP during measurements on delicate plant material such as grass leaves with circular cross section, and the effectiveness is shown with respiration measurements on a harp of Deschampsia flexuosa leaves. We conclude that the best solution for measurements with portable photosynthesis systems is to avoid LMP rather than trying to correct for the effects.     

Facile measurement of protein stability and folding kinetics using a nano differential scanning fluorimeter

With advancements in high‐throughput generation of phenotypic data on mutant proteins, it has become important to individually characterize different proteins or their variants rapidly and with minimal sample consumption. We have made use of a nano differential scanning fluorimetric device, from NanoTemper technologies, to rapidly carry out isothermal chemical denaturation and measure folding/unfolding kinetics of proteins and compared these to corresponding data obtained from conventional spectrofluorimetry. We show that using sample volumes 10‐50‐fold lower than with conventional fluorimetric techniques, one can rapidly and accurately measure thermodynamic and kinetic stability, as well as folding/unfolding kinetics. This method also facilitates characterization of proteins that are difficult to express and purify.     

When is stream invertebrate drift catastrophic? The role of hydraulics and sediment transport in initiating drift during flood events

1. The term ‘catastrophic drift’ is used to describe the large‐scale displacement of invertebrates that occurs during periods of increased river discharge. However, the physical processes that lead to animals entering the water column at such times remain poorly understood. Specifically, the hypothesis that the movement of bed sediments during floods triggers a large increase in drift has lacked a rigorous field test. 2. Using a portable flume, the hydraulic conditions and rates of bedload transport associated with small, frequent floods were created in situ within a reach of a gravel bed river. Experiments focussed on the patches of fine sediment which are the dominant source of bed material transported during small floods. The flume produced near bed velocities of up to 2 m s^?1 over the patches, increasing shear stress, initiating sediment transport and causing invertebrates to enter the drift. 3. The total number of individuals lost from the bed, as well as the taxonomic composition of the drift, were influenced strongly by shear stress and bedload. The rate of loss from the bed was low at shear stresses <9 dynes cm^?2 (0–4 individuals min^?1 from the 0.5 m² flume bed area). Once shear stress exceeded 9 dynes cm^?2, the threshold that resulted in consistent bedload transport from the patches, the rate of loss of animals increased to a maximum of 56 individuals min^?1. When bedload transport rates were at their highest, the taxonomic composition of the drift was more similar to the benthos than it was to the drift observed when bed material was stable. 4. Absolute rates of bedload transport created by the manipulations were extremely low (<7 g m^?1 s^?1) and typical of those measured during small, frequent floods. Events of this magnitude do not break up the armour layer across the reach as a whole and so exposed patches of fine sediment are the principal source of bedload material. Consequently, discharge events not considered as disturbances in geomorphic terms may initiate frequent episodes of so‐called ‘catastrophic drift’ from patches of stream bed.     

The use of PIT telemetry to study movements of ammocoetes and metamorphosing sea lampreys in river beds

Passive integrated transponder (PIT) tags were surgically implanted in 118 sea lamprey Petromyzon marinus ammocoetes which were left to recover in the laboratory for 2 months. During this period 55 individuals started to metamorphose. In the late summer of 2002 the tagged animals were released in a small tributary of the River Mondego, Portugal, and were regularly monitored for a period of 2 months using a portable PIT tag reader. The distribution of the released animals changed from an initial uniform pattern to a random distribution, and then to an aggregated pattern. At the end of the first week 60% of the tagged sea lampreys had already left the study area, indicating their dynamic behaviour. Ammocoetes were more active than metamorphosing sea lampreys, and downstream movements were more frequent when compared to the upstream ones, which were usually a short distance. In order to determine the influence of the dark‐light cycle in the diel activity rhythms, 10 tagged sea lamprey ammocoetes were released in a tank (2000 l capacity) and their position monitored twice a day, for a period of 1 month. Ammocoetes locomotor activity appeared to be conditioned by circadian rhythms, and they were particularly active during darkness.     

输血前检测技术的应用与展望

精准输血对疾病治疗、急诊抢救意义重大。开展输血前多项标志物检测是保障精准治疗的关键,是降低输血风险的前提。输血前检测主要是指为保证输血安全、预防交叉感染,从而对血型、凝血、感染等进行检测。其常规检测指标包括血型、交叉配血、纤维蛋白原、病毒性肝炎、人类免疫缺陷病毒和梅毒等。传统的临床输血前检测技术以免疫分析为主。随着临床救治需求由院内向现场救治拓展,电化学传感技术、微流控技术、光谱技术等新技术也逐步发展用于输血前快速检测。基于此,本文综述了不同输血前检测技术的应用场景和优缺点,分析了系列新技术在输血前检测中的应用及未来发展趋势,为推动输血前检测乃至疾病标志物快速检测技术的发展提供参考。     

Techniques for live capture of deepwater fishes with special emphasis on the design and application of a low-cost hyperbaric chamber

A cost effective, simple, portable hyperbaric chamber was constructed from polyvinyl chloride to aid in the collection of adult rockfishes Sebastes sp. to hold as broodstock. This system was designed to recompress fishes quickly once brought to the surface on hook and line, and to allow for decompression over a period of days. The hyperbaric chamber is capable of continuous stable operation at <1 033 515 N m⁻² and can accommodate fishes up to 91·4 cm in length and 26·8 cm in diameter. Pressure in the chamber is maintained by a Goulds Booster pump that delivers continuous pressure and supplies sea water at a rate of 3·8 to 7·6 l min⁻¹ to as many as four chambers. The hyperbaric chamber operated very effectively and allowed successful decompression of 12 cowcod Sebastes levis captured at depths of 90·2 to 146·3 m.     

Chloroplast ultrastructure and thylakoid polypeptide composition are affected by different salt concentrations in the halophytic plant Arthrocnemum macrostachyum

The effect of different external salt concentrations, from 0 mM to 1030 mM NaCl, on photosynthetic complexes and chloroplast ultrastructure in the halophyte Arthrocnemum macrostachyum was studied. Photosystem II, but not Photosystem I or cytochrome b6/f, was affected by salt treatment. We found that the PsbQ protein was never expressed, whereas the amounts of PsbP and PsbO were influenced by salt in a complex way. Analyses of Photosystem II intrinsic proteins showed an uneven degradation of subunits with a loss of about 50% of centres in the 0 mM NaCl treated sample. Also the shape of chloroplasts, as well as the organization of thylakoid membranes were affected by NaCl concentration, with many grana containing few thylakoids at 1030 mM NaCl and thicker grana and numerous swollen thylakoids at 0 mM NaCl. The PsbQ protein was found to be depleted also in thylakoids from other halophytes.