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1.
MICHAEL D. BAKER CHARLES R. VOSSBRINCK JAMES J. BECNEL JOSEPH V. MADDOX 《The Journal of eukaryotic microbiology》1997,44(3):220-225
ABSTRACT. Sequences of the small subunit rRNA genes of Amblyospora californica and an Amblyospora sp. from Culex salinarius were determined. These sequences were compared phylogenetically with 16 other microsporidia. The results suggest Amblyospora forms a sister taxon to the rest of the microsporidia examined. The basal position of Amblyospora is discussed with respect to the evolution of microsporidian life cycles. These sequences represent the longest microsporidian small subunit rRNA genes sequenced to date, 1,359 and 1,358 bp, respectively. Structural features and GC content (49% for both) are comparable to those of other microsporidia which have been sequenced. 相似文献
2.
SCOTT LYELL GARDNER 《Zoological Journal of the Linnean Society》1991,102(2):169-201
Coevolution was studied in six species of rodents of the genus Ctenomys and their parasitic nematodes of the genus Paraspidodera , collected in Bolivia. Representatives of the families Octodontidae and Caviidae were used as outgroups for the mammals, and nematodes from caviids were used as outgroups of the nematodes from ctenomyids. For the nematodes, quantitative and qualitative morphological characteristics of both males and females and electrophoretic characters of both sexes were used to generate phylogenetic hypotheses of evolutionary relationships of the OTUs occurring in hosts of different species. Concordance estimates of cladograms generated from biochemical—genetic and morphological data of the nematodes show a percentage incongruence (Mickevich-Farris Incongruence Statistic or I MF ) of 8.23% in the character sets. Parsimony mapping, testing concordance of topologies between the trees derived from both analysis of both morphological and biochemical—genetic data indicates an overall agreement of 82.3°. Comparisons of topologies of the host and parasite cladograms, as measured with parsimony mapping, showed 70.8% concordance, indicating substantially more cospeciation than host-switching in the Ctenomys-Paraspidodera host-parasite system. Nematodes of the genus Paraspidodera appear to have invaded the Ctenomys lineage from an origin in caviids sometime before the ctenomyids began to diversify in early Pleistocene time. 相似文献
3.
Molecular evolution of pteridophytes and their relationship to seed plants: Evidence from complete 18S rRNA gene sequences 总被引:1,自引:0,他引:1
Complete 18S ribosomal RNA sequence data from representatives of all extant pteridophyte lineages together with RNA sequences from different seed plants were used to infer a molecular phylogeny of vascular plants that included all major land plant lineages. The molecular data indicate that lycopsids are monophyletic and are the earliest diverging group within the vascular land plants, whereasPsilotum nudum is more closely related to the seed plants than to other pteridophyte lineages. The phylogenetic trees based on maximum likelihood, parsimony and distance analyses show substantial agreement with the evolutionary relationships of land plants as interpreted from the fossil record. 相似文献
4.
Phylogenetic relationships of the garter snakes based on DNA sequence and allozyme variation 总被引:1,自引:0,他引:1
ALAN DE QUEIROZ ROBIN LAWSON 《Biological journal of the Linnean Society. Linnean Society of London》1994,53(3):209-229
We estimated phylogenetic relationships among 26 species of garter snakes (genus Thamnophis ) using allozyme and mitochondrial cytochrome b gene nucleotide sequence variation. Parsimony analyses of the two data sets give substantially different estimates of phylogeny. Several lines of evidence indicate that much of this conflict is due to error associated with the restricted number of characters in each data set. Such sampling error may be reduced by combining all the characters; we therefore present an estimate of phylogeny based on parsimony analysis of all the data combined. All our analyses support several conclusions in conflict with previous views: a very distant relationship between T.errans and T. elegans , non-monophyly of the elegans group (even excluding T: errans ), and nesting of the form validus (previously considered a member of the genus Nerodia ) within Thamnophis.
The combined analysis gives an almost fully resolved tree. However, bootstrapping indicates only weak support for many clades in this tree. Furthermore, paraphyly of the assemblages of cytochrome b gene lineages within T. elegans and T. radix indicate the potential for discordance between the mitochondrial DNA (mtDNA) and species phylogenies through the sorting of ancestral mtDNA polymorphisms. These problems suggest the need for assaying additional characters, especially ones likely to be independent of those used in the present study. 相似文献
The combined analysis gives an almost fully resolved tree. However, bootstrapping indicates only weak support for many clades in this tree. Furthermore, paraphyly of the assemblages of cytochrome b gene lineages within T. elegans and T. radix indicate the potential for discordance between the mitochondrial DNA (mtDNA) and species phylogenies through the sorting of ancestral mtDNA polymorphisms. These problems suggest the need for assaying additional characters, especially ones likely to be independent of those used in the present study. 相似文献
5.
Mitochondrial DNA sequence diversity and the colonization of Scandinavia by house mice from East Holstein 总被引:3,自引:0,他引:3
6.
C. Baroni Urbani 《Insectes Sociaux》1993,40(3):233-260
Summary Three alternative hypotheses about the evolution of recruitment behaviour in ants, based on accounts in the literature, are compared by means of a cladistic analysis. The three hypotheses are the following:Hypothesis 1. Increasingly efficient recruitment behaviours exhibited by different ant species have been shaped by or are correlated with ant phylogeny.Hypothesis 2. Increasingly efficient recruitment behaviours represent necessary evolutionary steps independently followed during the evolution of different ant clades.Hypothesis 3. Differently efficient recruitment behaviours have been selected in a convergent way among different species by similar population/environmental constraints.In a first stage of the analysis, these hypotheses have been compared in terms of parsimony (i.e. in terms of tree length = TL) of alternative cladograms based on recruitment behaviour only. The analysis gave the following results: Hypothesis 1, TL = 4; Hypothesis 2, TL = 18; Hypothesis 3, TL = 11. At least in terms of parsimony, hence, Hypothesis 1 appears to be the best. This hypothesis, however, cannot be retained for its total lack of congruence with current views on ant phylogeny. Among the remaining two hypotheses, Hypothesis 3 is again much (ca. 40%) more parsimonious than Hypothesis 2, but the retention index for recruitment behaviour on the relative cladogram is 0.2 as compared with 0.7 for Hypothesis 2. Practically, this implies biologically very implausible behavioural evolution indicated by very improbable ancestors for the species included in the analysis. In the case of recruitment evolution the biological credibility of each hypothesis is inversely proportional to its parsimony.The three hypotheses on the evolution of recruitment behaviour are compared again taking into account the morphological and behavioural correlates of recruitment. The results confirm those obtained by simple cladistic analysis of behaviour alone, namely that an obligatory (i. e. neither reversible nor random) increase in recruitment efficiency has been repeatedly selected within different ant clades. Inclusion of the recruitment correlates allows, in addition, a more precise formulation of the implications of each hypothesis and a tentative test of two other alternatives deduced from the literature. Most papers dealing with recruitment assume this behaviour to be controlled by a single gland, while at least two experimental analyses show that more than one gland is likely to be involved as behavioural releaser. A cladistic approach allowed testing of the following two adaptational hypotheses: A) Synergic behavioural control by several glands, allowing shift of the dominant role from one gland to another. B) Single gland control, making improbable the replacement of one gland by another that performs the same function. The results of the analysis appear to favour alternative A slightly, though neither alternative results in implausible evolutionary paths.It is stressed that parsimony remains the sole decisional criterion when no other criteria are available but it can by no way be preferred to the slightest trace of biological common sense. 相似文献
7.
ROBERT W. SCOTLAND 《Botanical journal of the Linnean Society. Linnean Society of London》1993,111(4):471-504
Variation in pollen morphology is described and illustrated for 36 genera of Acanthaceae with contorted corolla aestivation. A parsimony analysis of pollen characters is presented. 相似文献
8.
While globin genes ctt-2β and ctt-9.1 in Chironomus thummi thummi each have a single intron, all of the other insect globin genes reported so far are intronless. We analyzed four globin genes
linked to the two intron-bearing genes in C. th. thummi. Three have a single intron at the same position as ctt-2β and ctt-9.1; the fourth is intronless and lies between intron bearing genes. Finally, in addition to its intron, one gene (ctt-13RT) was recently interrupted by retrotransposition. Phylogenetic analyses show that the six genes in C. th. thummi share common ancestry with five globin genes in the distantly related species C. tentans, and that a 5-gene ancestral cluster predates the divergence of the two species. One gene in the ancestral cluster gave rise
to ctn-ORFB in C. tentans, and duplicated in C. th. thummi to create ctt-11 and ctt-12. From parsimonious calculations of evolutionary distances since speciation, ctt-11, ctt-12, and ctn-ORFB evolved rapidly, while ctn-ORFE in C. tentans evolved slowly compared to other globin genes in the clusters. While these four globins are under selective pressure, we
suggest that most chironomid globin genes were not selected for their unique function. Instead, we propose that high gene
copy number itself was selected because conditions favored organisms that could synthesize more hemoglobin. High gene copy
number selection to produce more of a useful product may be the basis of forming multigene families, all of whose members
initially accumulate neutral substitutions while retaining essential function. Maintenance of a large family of globin genes
not only ensured high levels of hemoglobin production, but may have facilitated the extensive divergence of chironomids into
as many as 5000 species.
Received: 31 December 1996 / Accepted: 16 May 1997 相似文献
9.
Spencer J. Greenwood Mitchell L. Sogin Denis H. Lynn 《Journal of molecular evolution》1991,33(2):163-174
Summary Phylogenetic relationships within the class Oligohymenophorea, phylum Ciliophora, were investigated by determining the complete small subunit rRNA (SSrRNA) gene sequences for the hymenostomesColpidium campylum, Glaucoma chattoni, and the peritrichOpisthonecta henneguyi. The affiliations of the oligohymenophoreans were assessed using both distance matrix (DM) and maximum parsimony (MP) analyses. Variations do exist in the phylogenies created by the two methods. However, the basic tree topologies are consistent. In both the DM and MP analyses the hymenostomes (C. campylum, G. chattoni, and the tetrahymenas) all form a very tight group associated with the peritrichO. henneguyi. TheTetrahymena lineage was monophyletic whereasColpidium andGlaucoma were more closely related to each other than either was to the tetrahymenas. The monophyly of the genusTetrahymena in the present analysis supports the phylogenies determined from morphological data and molecular sequence data from the histone H3II/H4II region of the genome. The perplexing and controversial phylogenetic position of the peritrichs is once again depicted in the present analysis. The distinctiveness of the peritrichOpisthonecta from both hymenostome and nassophorean ciliates based on evolutionary distances suggests that the elevation of the peritrichs to a higher taxonomic rank should be reconsidered. 相似文献
10.
Motoo Kimura 《Journal of molecular evolution》1981,17(2):110-113
Summary Goodman et al's (1975) claim of accelerated evolution in the early stages of globin evolution is based on an erroneous assignment of the time of divergence of vertebrate myoglobin and hemoglobin. When this is corrected, there is no basis for their claim. The data are much more consistent with the nearly constant rate expected on the neutral mutation-random drift hypothesis than with the uneven rates expected if most amino acid changes were caused by substitution of favorable mutants through Darwinian selection. In addition, the majority of the codons determined by their maximum parsimony method have turned out to be wrong when compared to the actual nucleotide sequences of rabbit and human hemoglobins determined by direct sequencing.Contribution No. 1314 from the National Institute of Genetics, Mishima, 411 Japan. 相似文献