Spatial but not temporal co-divergence of a virus and its mammalian host

Co-divergence between host and parasites suggests that evolutionary processes act across similar spatial and temporal scales. Although there has been considerable work on the extent and correlates of co-divergence of RNA viruses and their mammalian hosts, relatively little is known about the extent to which virus evolution is determined by the phylogeographic history of host species. To test hypotheses related to co-divergence across a variety of spatial and temporal scales, we explored phylogenetic signatures in Andes virus (ANDV) sampled from Chile and its host rodent, Oligoryzomys longicaudatus. ANDV showed strong spatial subdivision, a phylogeographic pattern also recovered in the host using both spatial and genealogical approaches, and despite incomplete lineage sorting. Lineage structure in the virus seemed to be a response to current population dynamics in the host at the spatial scale of ecoregions. However, finer scale analyses revealed contrasting patterns of genetic structure across a latitudinal gradient. As predicted by their higher substitution rates, ANDV showed greater genealogical resolution than the rodent, with topological congruence influenced by the degree of lineage sorting within the host. However, despite these major differences in evolutionary dynamics, the geographic structure of host and virus converged across large spatial scales.     

Tadpole shrimp structure macroinvertebrate communities in playa lake microcosms

Laboratory microcosms were used to assess whether tadpole shrimp, Triops sp., affect community structure of other native macroinvertebrates in playa lakes of the Southern High Plains of Texas. Removal of tadpole shrimp shortly after hatching reduced abundances of many taxa, and decreased subsequent taxonomic richness and diversity. For many invertebrates, the presence of tadpole shrimp in low numbers had a positive effect on mean abundance. Direct effects of tadpole shrimp include the reduction of prey species abundance, which in turn may alter biotic interactions among other taxa. Indirect effects include physical modification of the environment during foraging through surface sediments. Results suggest that tadpole shrimp may be a key species controlling structure of macroinvertebrate communities in playa lakes.     

Isolation and characterization of microsatellite markers in Oligoryzomys longicaudatus (Muridae, Sigmodontinae, Oryzomini), the natural reservoir of genotype Andes hantavirus

The rodent Oligoryzomys longicaudatus or long-tailed pygmy rice rat is the reservoir of the aetiological agent of the hantavirus pulmonary syndrome in southern Argentina and Chile. We characterize 11 polymorphic microsatellite loci which would be useful for studies on microgeographical population structure in the species. Amplification of these loci in 42 individuals from four natural populations revealed four to 21 alleles per locus, and values of observed heterozygosities ranging from 0.371 to 0.896. Cross-species amplifications showed that some of the primers designed may be useful for other species of the genus Oligoryzomys.     

Belonolaimus Longicaudatus Host Status and Pathogenicity on Sweetpotato

Sting nematode is acutely damaging to a wide range of crops and is relatively common in sandy soils in the southeastern United States. Sweetpotato is an important crop in this region, and its production may be expanding to localities where sting nematode is an important pest. Despite this, the relationship between sweetpotato and sting nematode is not well-defined. Therefore, the objectives of this study were to assess (1) the relative host status of sweetpotato for sting nematode and (2) damage potential of sting nematode on sweetpotato in repeated greenhouse experiments. A known sting nematode host (field corn), a known poor host (sunn hemp), and sweetpotato cultivars susceptible (‘Beauregard’) and resistant (‘Covington’) to southern root-knot nematode were challenged with sting nematode. In both trials, field corn supported greater final soil sting nematode abundances than sunn hemp or either sweetpotato cultivar. Based on the average reproductive factor, field corn was confirmed as a susceptible host, whereas sunn hemp and sweetpotato were poor hosts. Sting nematode did not impair the growth of any crop, suggesting greenhouse conditions were not conducive to damage since field corn sustains damage in field conditions. These results suggest that sunn hemp and sweetpotato could be useful rotation crops for managing sting nematode, but future work is needed to assess sting nematode pathogenicity on these crops under field conditions.     

Reproductive isolation and genetic differentiation in North American species of Triops (Crustacea: Branchiopoda: Notostraca)

Electrophoretic analysis of 31 populations, ranging from California to Kansas, indicates that the North American tadpole shrimp Triops longicaudatus (LeConte) is actually a mixture of at least two reproductively isolated species. In the central United States, the predominant species is T. longicaudatus, which is found typically in ephemeral prairie pools. In the southwestern United States, the predominant species is Triops newberryi (Packard), which characteristically inhabits large playa pools. The two species coexist occasionally and in sympatric situations they are reproductively isolated from each other. The two species are genetically distinct at a level greater than is typical of conspecific populations. These genetic differences are correlated with subtle morphological differences and profound differences in reproductive biology. Both species represent complexes of bisexual and unisexual populations. Bisexual populations of T. longicaudatus are usually composed of males and females in approximately equal frequencies; bisexual populations of T. newberryi are composed of males in low frequencies and self-compatible hermaphrodites. Unisexual populations of both species apparently consist entirely of self-compatible hermaphrodites. This revised version was published online in August 2006 with corrections to the Cover Date.     

不同栖息环境的两种啮齿动物Vkorc1基因多态性

维生素K环氧化物还原酶复合物亚基1基因(Vkorc1)的变异与啮齿动物对抗凝血灭鼠剂的抗药性密切相关。为掌握Vkorc1基因变异在野栖类和家栖类啮齿动物中的流行情况,从山西省13个县(市、区)的农田和14个县(市、区)的养殖场采样,检测长尾仓鼠(Cricetulus longicaudatus)和黄胸鼠(Rattus tanezumi) Vkorc1基因编码区的变异位点及携带不同变异位点的个体的分布情况。结果显示,长尾仓鼠在13个采样地均有捕获,整体占野栖类啮齿动物的23.29%;黄胸鼠分布于8个采样地,整体占家栖类啮齿动物的68.63%。在长尾仓鼠样本(n=105)中检测到6个沉默突变位点和5个错义突变位点,其中,沉默突变C438T (His146His)的变异率最高,为67.62%;共有17只长尾仓鼠样本存在错义突变位点。黄胸鼠样本(n=70)中存在6个沉默突变位点和1个错义突变位点,其中,最常见的沉默突变位点A321C (Ile107Ile)和T411C (Thr137Thr)的变异率均达到18.57%;8只黄胸鼠样本存在与其抗药性相关的A416G (Tyr139Cys)错义突变...