THE LASER TOMOGRAPHICAL METHOD USINGMINIMUM OF PROJECTION FOR BIOLOGICAL OBJECT STRUCTURE STUDY

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Play behaviour and active training of Montagu’s harrier (Circus pygargus) offspring in the post-fledging period

Play bouts and active training of juveniles by Montagus harrier (Circus pygargus) adults in the post-fledging period were observed. Fledglings often played with prey and with a variety of inanimate objects such as bits of moss, regurgitated pellets, sticks and a wad of hay. Inanimate objects selected for play were, in length, very similar to the common vole (Microtus arvalis), which is the most common prey of the species during their breeding period. Some recently fledged individuals were trained to capture invertebrate prey by adults demonstrating techniques for the fledglings and thus develop their hunting skills. Training sessions took place only in the foraging areas of the adult birds.     

Wooden objects from Ohalo II (23,000 cal BP), Jordan Valley, Israel

Eight wooden objects were found at Ohalo II, a submerged and well-preserved site in the Sea of Galilee, Israel. The fisher-hunter-gatherers' site has been radiometrically dated to 22,500-23,500 (cal BP) with 45 assays read by four laboratories. The wooden objects were found on brush-hut floors. They include a bark plank with polish and use signs, pencil-shaped specimens with longitudinal shavings, and other types that may have been decorative or symbolic. One incised wooden object is identical in size and incision pattern to a gazelle bone implement found in a grave, behind a human skull. The recovered wooden objects are not directly related to hunting, gathering, or fishing, and frustratingly, there are no remains of bows, arrows, spears, handles, or other such items. Nonetheless, the objects present a wide repertoire in terms of size, shape, and possible function. The new finds add to the growing body of evidence concerning the use of perishable materials during the Upper Paleolithic.     

Children's ideas of animals' internal structures

Children's understanding about animal internal structure can be affected by several factors which are poorly understoodby teachers. We conducted a large sample study (n=702) of children aged 6–16 years (Grades 1-9) examining children's responses to animals of various size, species and dimensions (2D and 3D objects), and exploring factors which might affect the development of their knowledge. Each child made a drawing of what they thought was inside a specimen animal. We found that using 2D representations of an animal negatively affected the content of children drawings.The effect of animalsize was shown only in children's understanding of skeletons, but not organ systems. The effect of animal species showedclear significant effect of children's ideas on both organ systems and skeleton. Investigation showed that parents' education level, children's experiences with animal-rearing and age significantly affected their scores from organ system. Surprisingly, school books were most frequently cited as sources of children's knowledge rather than their own experience, or information from the internet, encyclopaedias, television or parents.     

Automated Identification of Filaments in Cryoelectron Microscopy Images

Since the foundation for the three-dimensional image reconstruction of helical objects from electron micrographs was laid more than 30 years ago, there have been sustained developments in specimen preparation, data acquisition, image analysis, and interpretation of results. However, the boxing of filaments in large numbers of images--one of the critical steps toward the reconstruction at high resolution--is still constrained by manual processing even though interactive interfaces have been built to aid the tedious and sometimes inaccurate boxing process. This article describes an accurate approach for automated detection of filamentous structures in low-contrast images acquired in defocus pairs using cryoelectron microscopy. The performance of the approach has been evaluated across various magnifications and at a series of defocus values using tobacco mosaic virus (TMV) preserved in vitreous ice as a test specimen. By integrating the proposed approach into our automated data acquisition and reconstruction system, we are now able to generate a three-dimensional map of TMV to approximately 10-A resolution within 24 h of inserting the specimen grid into the microscope.     

基于目标颜色基及梯度方向匹配的菌落分割计数算法

【目的】通过菌落测试片提取菌落并计数,在农业、食品业、医疗卫生等领域中是一项常用且重要的工作。目前,菌落自动计数算法大都是以菌落培养皿为主要工作对象,对菌落测试片适用性较差。另外,目前相关技术在常规的粘连物体分割中有着较好的效果,但在菌落分割计数中,由于菌落本身的形态特征,对粘连菌落分割计数的效果尚不够精准。【方法】为解决此类问题,本文提出一种基于目标颜色基及梯度方向匹配的菌落分割计数算法。首先利用图像中菌落的颜色特征作为基,将图像转换到基空间内,以增强菌落与背景之间的差异,其次利用菌落图像的梯度幅值特征对梯度方向进行滤波,然后通过梯度方向进行匹配,进而将粘连的菌落分割,最后利用非极大值抑制的方法筛选出菌落并计数。【结果】经试验,本研究算法的计数精度可达98.00%,能够满足实际需求。【结论】在针对菌落的目标分割计数中,本研究算法不仅计数精度高,而且具有较好的鲁棒性,在对不同厂家的菌落总数测试片菌落分割计数中均有优异效果;然而在对大面积目标的检测分割中算法的准确率会有所下降,因此,该算法更适合于菌落等小目标的检测分割。     

Line transect methods for plant surveys

Interest in surveys for monitoring plant abundance is increasing, due in part to the need to quantify the rate of loss of biodiversity. Line transect sampling offers an efficient way to monitor many species. However, the method does not work well in some circumstances, for example on small survey plots, when the plant species has a strongly aggregated distribution, or when plants that are on the line are not easily detected. We develop a crossed design, together with methods that exploit the additional information from such a design, to address these problems. The methods are illustrated using data on a colony of cowslips.     

陕西凤翔孙家南头秦墓出土人骨中C和N同位素分析

本文对陕西凤翔孙家南头秦墓出土的春秋战国时期人骨中C和N稳定同位素组成进行了测试分析。结果表明: 人骨样品均可用于食谱分析; 由δ13C和δ15N值综合分析可知, 春秋战国时期陕西凤翔地区秦先民是以C4类植物为主食、辅以少量肉食的杂食性食谱; 经济模式可能为农业与畜牧兼营, 以种植黍、粟类等旱地作物的农业形式为主, 并辅以驯养牲畜; 根据墓主与殉人的δ13C和δ15N值对比分析, 推测殉人可能是与墓主饮食方式较为相近的姬妾或仆从之类的人;春 秋中期至战国晚期秦先民的食物结构较为稳定, C4植物比例与δ15N发生变化的原因可能与当时历史的变迁与社会的发展有一定的关系。     

Hyalomma truncatum (Acari; Ixodidae): evidence for the inability of adult ticks to discriminate between colours

Behavioural investigations into the perception and differentiation of coloured objects by unfed adult Hyalomma truncatum ticks revealed that silhouettes of blue, green, red and yellow colour, under illumination by a sun-simulating waveband spectrum, are perceived by the ticks and responded to equally by a directed response. Two green or dark grey rectangles each with a luminance contrast ratio of 5 : 1 against the white wall of the test arena in combination with an overlapping, equally sized dark grey or green target were consistently reached by ticks in a ratio of 2 : 1. Since the outer targets were occupied by the double number of ticks compared with the central silhouette this shows that the response is independent of the colour of the object. Investigations into target perception under monochromatic radiation of different wavelength ranges which were evenly adjusted in their irradiances revealed that ticks responded equally to a black target irradiated by blue, green, yellow and red light of wavelengths 428–472, 517–563, 549–591 and 606–654 nm, respectively. These results indicate the lack of true colour vision in H. truncatum.     

On the concept of the nonequilibrium conformon (self-organization of a selected degree of freedom in biomolecular systems)

A concept of the conformon as a dynamical bound state formed by a flux of particles interacting with conformational degrees of freedom is proposed. The correlation of variables of the subsystems composing such a formation are considered.