A phylogenetic study of the free-living amoeba

Immunological distances were determined for four strains of the free-living amoeba classified as Amoeba proteus, two strains classified as Polychaos dubia and a single strain classified as Chaos carolinensis. The data show that the _ShP strain does not belong to the proteus group; that A. proteus is more closely related to C. carolinensis and is derived from Chaos as is the _ShP strain; that P. dubia and C. carolinensis are the more distantly related species and appear to be the first of the above to have diverged from a common ancestor; and that the amoebae have a long evolutionary history. The accuracy of the phylogenetic tree and the distance Wagner network was discussed. Since the amoebae may be polyphyletic in origin, the latter was assumed to be a more accurate representation of the immunological distance data.     

Biochemical systematics of the viviparous fish family Goodeidae

The systematic relationships of the freshwater teleost family Goodeidae inferred from a distance Wagner analysis of allozyme data are mainly consistent with previous systematic hypotheses, including some of those based on karyology. However, a recently proposed hypothesis based on bony anatomy of the mouth is not supported. Branching patterns of species within genera were 100% supported based on a jack knife consensus test except for Xenotoca , which is apparently a polyphyletic lineage. A fossil goodeid of Miocene age was used to calibrate the molecular clock for goodeids at Nei D = 1.0 = 11.3 million years.     

Competitive effects of herbaceous vegetation on tree seedling emergence,growth and survival: Does gap size matter?

Question: What is the effect of gap size on the seedling emergence, growth and survival of four common tree species in wooded pastures? Location: A pasture in the Jura mountains, Switzerland. Methods: Seeds were sown in a complete three‐way factorial design with eight blocks in May 2003. Each block consisted of a competition treatment (four gap sizes including zero) and a mowing treatment (mown and unmown). Emergence, survival and total biomass of tree seedlings of three species (Picea abies, Acer pseudoplatanus and Fagus sylvatica) were measured. A fourth species (Abies alba) failed to germinate. Results: Gaps had a positive influence on the early stages of tree development for all species. Larger gaps favoured growth and survival more than small gaps. Seedling growth was higher when vegetation around the openings was mown. Mowing the vegetation at gap size zero enhanced both growth and survival compared to unmown vegetation. Mown gaps larger than zero had increased seedling desiccation but decreased seedling predation. Species showed similar trends in their emergence and growth responses to gap size and mowing treatments but for Picea emergence rate was higher and survivorship was lower than for Acer and Fagus. Conclusions: Gap size does matter for tree seedling success but even in more favourable large gaps only a small percentage of seedlings emerged and survived. The effects of gaps on tree seedling establishment are complex as a result of interactions between biotic and abiotic changes caused by gaps.     

Cytotoxic withanolides from the aerial parts of Tubocapsicum anomalum

Ten new withanolides (1–10) and three artificial withanolides (11–13) were isolated from the aerial parts of Tubocapsicum anomalum, together with five known analogues (14–18). Their structures were determined on the basis of extensive spectroscopic and chemical methods. They include seven acnistin–type (1–4, 11, 14 and 15), three withajardin–type (5–7), and eight normal–type (8–10, 12, 13 and 16–18) withanolides. Of normal–type withanolides, a chemical conversion from the 16α,17α–epoxywithanolide (16) to Δ^13,14–16α–hydroxywithanolide (18) was achieved by Wagner–Meerwein rearrangement. All isolates were evaluated for their cytotoxicity against four human tumor cell lines (HCT–116, HepG2, MCF–7 and A375). Among them, compounds 1–3, 6–8, 14, 16–18 showed cytotoxic activity with IC₅₀ values of 0.24–8.71 μM.     

Modeling the effects of enclosure size on geometry learning

Several recent studies have shown that chickens, fish, and humans trained to find a reward in a corner of a rectangular enclosure with distinctive features rely more on the geometry of the enclosure in small enclosures and rely more on the features in large enclosures. Here, these results are modeled using a recent associative model of geometry learning [Miller, N.Y., Shettleworth, S.J., 2007. Learning about environmental geometry: an associative model. J. Exp. Psychol. Anim. B 33, 191–212]. By adjusting the salience of either geometric or featural information or both the model is capable of reproducing much of the data on the effects of enclosure size on geometry learning.     

Quantitative determination of secondary amines: measurement of N-methylalanine

A simple, rapid method for the quantitative estimation of secondary amines was developed based upon the reaction of this group of compounds with sodium nitroprusside and acetaldehyde. The conditions for optimal color production are described and the extent of interference by various primary and tertiary amines is evaluated. No appreciable interference from other compounds commonly found in biological tissues was found. This assay permits estimation of 0.05–0.80 μmoles of N-methylalanine. The possible application of this method to the measurement of proline and hydroxyproline is suggested.     

Cladistic Analysis of Sphagnum in Northeast China

This paper deals with the phylogenetic relationships in Sphagnum using the Wagner Groundplan-Divergence method. The main principle of the Wagner GPD method is grouping based on synapomorphy derived from outgroup comparison and ontogenetic analysis whenever possible. We make use of 21 available characters from gametophytes, estimate plesiomorphic conditions on the principle that characters found in the group under study and in most or all members of related groups are plesiomorphic, while those found only within the group are apomorphic, and finally arrange taxa according to shared derived features. In the Wagner tree diagrams, all characters can be placed on a Wagner tree so that the various relationships in the genus Sphagnum can be visualized. The results were as follows: 1. The genus Sphagnum can be divided into six sections, i.e. Sphagnum, Squarrosa, Acutifolia, Cuspidata, Subsecunda and Polyclada. They are almost consistent withe those derived from classical and numerical taxonomy of Sphagnum. 2. In Wagner tree diagrams, Section Sphagnum and Sect. Squarros were branched earlier, so they are primitive and the other four sections were last branched, so they are derived. Sphagnum magellanicum is a rather primitive species, whereus S. girgensohnii andS. fimbriatum are rather advanced ones in the 14 species of Sphagnum investigated.     

Responses of native and invasive plant species to selective logging in an Acacia koa‐Metrosideros polymorpha forest in Hawai'i

Questions: Is the introduced timber species Fraxinus uhdei invasive in Hawai'i? Has logging disturbance facilitated the spread of Fraxinus and other alien species? Location: Windward Mauna Kea, island of Hawai'i. Methods: We surveyed 29 plots which were established before selective logging of the native tree Acacia koa in 1971 to determine if Fraxinus spread beyond the borders of an existing plantation and if other alien species increased. We created gaps in the canopy of the Fraxinus plantation and measured seed rain and regeneration, and we sampled foliar and soil nutrients inside and around the plantation. Results: Basal area of Fraxinus increased from 0.7 m².ha^‐1in 1971 to 10.8 m².ha^‐1 in 2000. Fraxinus was not found in plots that were located more than 500 m from those where it occurred in 1971 except along a road. Basal area of Acacia koa decreased after logging but subsequently recovered. Occurrence of the alien vine Passiflora tarminiana and alien grass Ehrharta stipoides decreased. Seedling regeneration of Fraxinus was prolific in gaps but did not occur under the canopy. Basal area of Fraxinus did not correlate with soil nutrient concentrations. Conclusions: Fraxinus was able to regenerate following logging more rapidly than native tree species. Basal area growth of Fraxinus was great enough to offset a decline in native trees and cause an increase in forest productivity. If the Fraxinus plantation is harvested, managers should plan ways of favoring regeneration of the native Acacia which is more valuable both for timber and for conservation.     

红羊新蚤的地理分布、宿主关系和鉴别特征的研究(蚤目：多毛蚤科)

自从红羊新蚤Neopsylla hopgyangensis Li,Bai & chen,1986从宁夏回族自治区的海原和贺兰山林区发现并报道(四川动物5(2)：1-3)以后,青海、甘肃和陕西均先后发现他们以往鉴定为二齿新蚤的大多数为红羊新蚤。本文报道红羊新蚤的地理分布、海拔、主要宿主及鉴别特征的应用。     

A cladistic study of Arillastrum, Angophora and Eucalyptus (Myrtaceae)

A cladistic study of Anllastrum, Angophora and Eucalyptus (Myrtaceae). Transformed cladistic; character compatibility; branch and bound, and Farris-Wagner methods gave similar solutions in a cladistic study of Arillastrum, Angophora and Eucalyptus. These analyses, based on morphological characters, indicate that Eucalyptus is a monophyletic group and that its sister taxon is Angophora.
Within Eucalyptus , subgenera Blakella and Corymbia are sister taxa to all other groups; subgenera Monocalyptus, Idiogenes and Gaubaea form a monophyletic group with subgenus Monocalyptus sister to subgenera Idiogenes and Gaubaea ; subgenera Symphyomyrtus and Telocalyptus together also form a monophyletic group and, with Eucalyptus similis (subgenus Eudesmia group 4), are sister to the Monocalyptus group. Eucalyptus subgenus Telocalyptus (4 species), Eucalyptus subgenus Idiogenes (1 species) and Eucalyptus subgenus Gaubaea (2 species) should not be recognized as subgenera and some individual species need further examination. Eucalyptus subgenus Eudesmia is a paraphyletic group.
Some characters are identified as parallelisms, e.g. axillary inflorescences, sepaline operculum, bristle glands, and clustered anthers. A more congruent interpretation of the single operculum of Eucalyptus subgenus Monocalyptus as at least partly petaline rather than solely sepaline in origin is suggested.
The area relationships for the taxa are concordant with those derived from geological and climatological information. New Caledonia is sister area to Australia, and within Australia southwestern Australia is sister area to south-eastern and north-eastern Australia.