Phylogeny of magpie‐robins and shamas (Aves: Turdidae: Copsychus and Trichixos): implications for island biogeography in Southeast Asia

Aim Magpie‐robins and shamas are forest and woodland birds of south Asia. There are two genera: Trichixos for the monotypic T. pyrrhopygus, and Copsychus for other species. Two species are widespread, whereas the others are restricted to specific islands. Endemicity is highest in the Philippines. Using phylogenetic methods, we examined how this group came to its unusual distribution. Location Mainland Asia from India to southern China, and islands from Madagascar to the Philippines. Particular emphasis is placed on the Greater Sundas and Philippines. Methods The phylogeny was estimated from DNA sequences of 14 ingroup taxa representing all nine currently recognized Copsychus and Trichixos species. The entire mitochondrial ND2 gene and portions of nuclear myoglobin intron 2 (Myo2) and transforming growth factor beta 2 intron 5 (TGFβ2‐5) were sequenced for all but two species. The phylogeny was reconstructed using maximum likelihood and Bayesian methods. The timing of divergence events was estimated using a relaxed molecular clock approach, and ancestral areas were examined using stochastic modelling. Results The group comprises three main clades corresponding to ecological types: Trichixos, a primary‐forest specialist; Copsychus magpie‐robins, open‐woodland and coastal species; and Copsychus shamas, thick‐forest species. Trichixos appears to be sister to the magpie‐robins, rendering Copsychus polyphyletic. The dating of phylogenetic nodes was too ambiguous to provide substantial insight into specific geographical events responsible for divergence within the group. Some patterns are nevertheless clear. Copsychus shamas reached the Philippines, probably in two separate invasions, and split into endemic species. Copsychus malabaricus and C. saularis expanded widely in the Greater Sundas and mainland Southeast Asia without species‐level diversification. Main conclusions Magpie‐robins are excellent dispersers and have diversified into distinct species only on isolated oceanic islands. Trichixos, a poor disperser, is restricted to mature forests of the Malay Peninsula, Sumatra and Borneo. Copsychus shamas are intermediate in habitat preference and dispersal capabilities. Their endemism in the Philippines may be attributed to early colonization and specialization to interior forests. In the Greater Sundas, C. malabaricus and C. saularis populations split and came together on Borneo to form two separate subspecies (of each species), which now hybridize.     

Is the juvenal plumage of altricial songbirds an honest signal of age? Evidence from a comparative study of thrushes (Passeriformes: Turdidae)

The function and evolution of avian plumage colouration has been the subject of many studies over the past decade, but virtually all of this research has focused on the plumages of sexually mature individuals. The colours and patterns of juvenal plumage, which is worn by altricial songbirds only for the first few months of life, have been the focus of few studies. We develop the idea that distinctive juvenile appearance may be a signal of sexual immaturity, serving to reduce aggression from conspecific adults. We use a comparative phylogenetic approach to test this hypothesis in the thrushes (Family Turdidae). Honest signals of reproductive immaturity should be more valuable when juveniles fledge into environments with aggressive adult conspecifics. Therefore, we predicted that distinctive juvenile appearance would be more likely to evolve in species with extended breeding seasons and high levels of territoriality. Because many tropical bird species exhibit year‐round territoriality and elongated breeding seasons, we used breeding latitude as a proxy for these variables. As predicted, distinctive juvenile appearance was significantly correlated with occupancy of tropical latitudes. While alternative explanations cannot be ruled out and more tests of the hypothesis are needed, the observed associations between breeding latitude and distinctiveness of juvenal plumage are consistent with our hypothesis that distinctive juvenal plumage evolved as a signal of sexual immaturity.     

Characterization of 38 microsatellite loci in the European blackbird, Turdus merula (Turdidae, AVES)

We characterized 38 microsatellite loci in the European blackbird, Turdus merula. Thirty-seven loci were identified by testing 242 loci that had been originally isolated in other avian species. One additional locus was isolated from a European blackbird genomic library. All loci were characterized in 20-29 blackbirds from a population in the Czech Republic and displayed between two and 16 alleles, with observed heterozygosity ranging from 0.04 to 1.00. Thirty-seven loci could be assigned a chromosome location in the zebra finch (Taeniopygia guttata) genome based on sequence homology.     

Some aspects of the synanthropization of nine species of the Turdidae family in Kaliningrad

Numbers, dynamics of distribution for ten years, and relations between density and the rate of urbanization in nine species of Turdidae are calculated. During the last ten years the area of spatial distribution of most species increased by 2–15 times. A positive relationship between the numbers of birds and the rate of urbanization is revealed in the Redstart (R_{N 142} = 0.16; p = 0.049) and the Black Redstart (R_{N 134} = 0.25; p = 0.03), a negative relationship was observed in the Nightingale (R_{N 134} = ?0.23; p = 0.006) and the Robin (R_{N 43} = ?0.28; p = 0.06). The numbers of Whinchat, Wheatear, and thrushes does not depend on the rate of urbanization.     

New records on the Red-tailed Wheatear,Oenanthe xanthoprymna,in Turkey

Abstract

Data are given on the distribution of the freshwater clam Corbicula fluminalis (Corbiculidae) in the Near East, with special reference to its north-western limit. Its present distribution is relatively stable, and this contrasts with the continuing expansion throughout Europe of C. fluminea and C. fluviatilis, two East Asian species that were introduced into America and thence into Europe. The distribution pattern of C. fluminalis in the Near East was shaped during the Pliocene. There were only small expansions in its range in Mesopotamia and the northern Levant during the Pleistocene Riss glacial, which is quite different from the situation in other parts of its range. During the pre-glacial Pleistocene (Ubeidiya) C. Jluminalis reached the Jordan rift valley. From there, either immediately or subsequently during the Riss glacial, it invaded the coastal rivers of the southern Levant and the Nile, reaching upstream as Far as Lake Tana. In Africa C. fluminalis met C. consobrina which had been there since the middle of the Pliocene.     

Red-rumped Wheatear,Oenanthe moesta,in Turkey

Abstract

Even in areas with a rich insect life inhabited by several species of swallows and swifts, different preferences and species assemblages during aerial hunting can be observed. Geographical differences in distribution and abundance, different habitat preferences, time of season and day as well as different range of hunting flights will influence local species assemblages and coexistence during aerial hunting.     

Gene trees,species trees and Earth history combine to shed light on the evolution of migration in a model avian system

The evolution of migration in birds has fascinated biologists for centuries. In this study, we performed phylogenetic-based analyses of Catharus thrushes, a model genus in the study of avian migration, and their close relatives. For these analyses, we used both mitochondrial and nuclear genes, and the resulting phylogenies were used to trace migratory traits and biogeographic patterns. Our results provide the first robust assessment of relationships within Catharus and relatives and indicate that both mitochondrial and autosomal genes contribute to overall support of the phylogeny. Measures of phylogenetic informativeness indicated that mitochondrial genes provided more signal within Catharus than did nuclear genes, whereas nuclear loci provided more signal for relationships between Catharus and close relatives than did mitochondrial genes. Insertion and deletion events also contributed important support across the phylogeny. Across all taxa included in the study, and for Catharus, possession of long-distance migration is reconstructed as the ancestral condition, and a North American (north of Mexico) ancestral area is inferred. Within Catharus, sedentary behaviour evolved after the first speciation event in the genus and is geographically and temporally correlated with Central American distributions and the final closure of the Central American Seaway. Migratory behaviour subsequently evolved twice in Catharus and is geographically and temporally correlated with a recolonization of North America in the late Pleistocene. By temporally linking speciation events with changes in migratory condition and events in Earth history, we are able to show support for several competing hypotheses relating to the geographic origin of migration.