Prunus necrotic ringspot virus isolates in stone fruit germplasm accessions and cultivars in Israel

Prunus necrotic ringspot virus (PNRSV) was detected in almonds, plum and apricot germplasm accessions and local almond cultivars in Israel. PNRSV was widespread both in wild and cultivated almond trees and uncommon in wild apricots and plums. The possible variation among the PNRSV isolates was initially evaluated by restriction analysis of PCR products representing the CP gene with the endonuclease RsaI and followed by nucleotide sequence analysis of selected isolates. It was concluded that all 13 isolates belong to group PV96, the largest cluster of PNRSV isolates, described previously. Two PNRSV isolates, one from a plum accession and one from an almond cultivar, were found to be distinct members of group PV96 with unique nucleotide modifications not found in other documented isolates of this virus. However, no PNRSV isolate typical to a specific host and/or to the Middle East region could be identified. This study expands the body of data on variability of PNRSV isolates and highlights the importance of assessing the virus status of germplasm collections by applying reliable diagnostic and differentiating methods.     

Use of high-ethanol-resistant yeast isolates from Nigerian palm wine in lager beer brewing

High-ethanol-resistant yeasts, characterized as Saccharomyces sp., were isolated from Nigerian palm wine with added sucrose for high gravity brewing. The yeast isolates that survived the highest ethanol production were used to ferment brewery wort and produced 8.2 to 8.5% (v/v) ethanol; values almost double that of the control yeast from a local brewery.     

Comparative transmission of, and varietal reaction to, three isolates of rice tungro virus disease

Comparative transmission by leafhoppers of three tungro isolates obtained from the Philippines, India and Malaysia, and of an infectious clone of the Philippine isolate of rice tungro bacilliform virus (RTBV) by agroinoculation, was conducted on 12 rice cultivars. The symptoms, including height of inoculated plants were recorded and the efficiency of RTBV and rice tungro spherical virus (RTSV) transmission was determined by enzyme-linked immunosorbent assay. In most cases, the reduction of height and leaf symptoms of plants infected with RTBV and/or RTSV by the three isolates were similar in any given cultivar. On cultivar ASD 7 , the Malaysian isolate showed more severe yellow orange leaf discolouration symptoms than the Indian isolate which in turn had more severe leaf discolouration than the Philippine isolate. On the other hand, cultivars ASD 7 and Ptb 18 produced the most severe yellow orange leaf discolouration when agroinoculated with an infectious RTBV clone of the Philippine isolate. There was some variation in the transmission profile of the two tungro viruses among the three isolates. However, there was no one clear set of characteristics by which one could use cultivars to distinguish isolates. The amount of viral DNA in agroinfected plants of cultivars Utri merah, Balimau putih, Utri Rajapan and ARC 11554 was low, while the amount was high in cultivars TN1, ASD7, Ptb 18 and TKM 6. There was high correlation between the amount of viral coat protein by ELISA and viral nucleic acid by DNA hybridisation on 10 agroinoculated rice cultivars; this might indicate that similar proportions of the total RTBV DNA are encapsidated in each cultivar.     

侵染香蕉的黄瓜花叶病毒株系的形态和生物学特征

对香蕉花叶病广东三个代表分离物的形态和生物学特征进行了较为全面的研究。在六种鉴别寄主上,斑驳类（ＭＭ）和断续条纹类（ＢＳ）分离物侵染较多的寄主种类诱导较为严重的症状,连续条纹类（ＣＳ）分离物侵染能力较弱。电镜观察表明：ＢＳ、ＣＳ和ＭＭ三个代表分离物的粒子呈球状、其粒子直径分别为２２．５、２４．３和２７ｎｍ,纯化的病毒粒子电泳相对迁移率分别为０．７２、０．５６和０．５１,在西葫芦上的增殖速度：不管在子叶或真叶,都是ＭＭ最快、ＢＳ次之、ＣＳ最慢。从西葫芦接种叶运转出接种叶的速度：ＭＭ和ＢＳ相似、ＣＳ明显较慢。在烟草上,三个分离物的运转速度和增殖速度以ＭＭ最快、ＢＳ次之、ＣＳ最慢;而且在烟草上随着接种后时间的延长,三个分离物除ＭＭ维持高浓度的时间较长外,ＢＳ和ＣＳ的都很短。在西葫芦和烟草上提纯产量,ＭＭ类最多、ＢＳ类次之、ＣＳ类最低。     

Cellular Lipid and Fatty Acid Compositions of Burkholderia pseudomallei Strains Isolated from Human and Environment in Viet Nam

Viet nam is known as an endemic area of melioidosis but its etiologic agent originated in Viet nam was not extensively studied. For the first time, we analyzed the cellular lipid and fatty acid compositions of 15 Vietnamese isolates of Burkholderia pseudomallei, 10 from humans and 5 from the environment. Cellular lipid compositions were analyzed by two-dimensional thin-layer chromatography on silica gel G plates. Cellular fatty acid methyl esters were analyzed by gas chromatography (GC) and gas chromatography/mass spectrometry (GC/MS). The major lipids in all the isolates were phosphatidylglycerol (PG), two forms of phosphatidylethanolamine (PE-1 and PE-2), and two forms of ornithine-containing lipid (OL-1 and OL-2). PE-1 contained non-hydroxy fatty acids at both sn-1 and ?2 positions, while PE-2 possessed 2-hydroxy fatty acids and non-hydroxy fatty acids in a ratio of 1: 1. Since snake venom phospholipase A₂ digestion of PE-2 liberated 2-hydroxy fatty acids, it was confirmed that these acids are at the sn-2 position of glycerol moiety. In both OL-1 and OL-2, amide-linked fatty acid was 3-hydroxy palmitic acid (3-OH-C16: 0), while ester-linked fatty acids were non-hydroxy acids in OL-1 and 2-hydroxy acids in OL-2. The total cellular fatty acid compositions of the test strains were characterized by the presence of 2-hydroxy palmitic (2-OH-C16: 0), 2-hydroxy hexadecenoic (2-OH-C16: 1), 2-hydroxy octadecenoic (2-OH-C18: 1), 2-hydroxy methylene octadecanoic (2-OH-C19CPA), 3-hydroxy myristic (3-OH-C14: 0) and 3-hydroxy palmitic (3-OH-C16: 0) acids. There were significant differences in the concentration of hexadecenoic (C16: 1), methylene hexadecanoic (C17CPA), octadecenoic (C18: 1) and methylene octadecanoic (C19CPA) acids among the Vietnamese isolates of B. pseudomallei. However, no significant difference was observed in cellular lipid and fatty acid components between strains of human and environmental origins.     

Infective behaviour and aphid-transmissibility of Italian isolates of potato virus Y in tobacco and peppers

When mechanically inoculated to susceptible tobacco (Nicotiana tabacum L.) cultivars, nine isolates of PVY from Umbria (Central Italy) and two from Southern Latium gave rise to rapid systemic infection which developed within 6–8 days after inoculation. Systemic spread of the same isolates was slower, or much slower, in infected pepper (Capsicum annuum L.) cultivars, 8–14 days for Southern Latium isolates and 20 - 35 days for Umbrian ones. Aphid (Myzus persicae)-moculation of pepper and tobacco plants with two of the Umbrian and one of the Southern Latium isolates confirmed the results from sap-transmission and showed that fewer inoculated pepper plants become infected, especially with Umbrian isolates. In agreement with the data on systemic spread, aphid-acquisition trials indicated that tobacco plants became efficient PVY sources for vectors 6–8 days after inoculation with either group of isolates. Peppers became efficient acquisition hosts 8–15 days after inoculation with Southern Latium isolates but not until 22–45 days after inoculation with Umbrian ones. Southern Latium isolates induced more severe symptoms in pepper cultivars than Umbrian isolates did. One of the Southern Latium isolates was able to systemically infect the resistant pepper cv. Yolo Y, which was never infected by the Umbrian isolates. The Umbrian isolates tested seem to be better adapted to tobacco than peppers, while Southern Latium ones are well adapted to both.     

Overview of Strain Characterization in Relation to Serological and Molecular Detection of Citrus tristeza <i>Closterovirus</i>

Tristeza is a devastating viral disease in all the citrus growing countries throughout the world and has killed millions of citrus trees in severely affected orchards. The citrus species grafted on sour orange rootstock are affected by this disease. Predominantly, the sweet orange, grapefruit and lime trees grafted on sour orange exhibit severe symptoms like quick decline, vein clearing, pin holing, bark scaling and degeneration leading to variable symptoms. Symptomatic expression of Citrus tristeza virus (CTV) in different hosts has been attributed to virus isolates which are from severe to mild. Different serological and molecular assays have been deployed to differentiate the strains of CTV. Citrus tristeza virus is diversified towards its strains on the basis of biological, serological and molecular characterization. Phenotypic expression is due to genetic alteration and different molecular basis have now been adopted for strain differentiation. This review will give a brief idea about the different CTV isolates, their characterization based on nucleic acid and serological assays. Different methods along with salient features for strain characterization has also been reviewed. This review will also open the new aspects towards formulation of management strategies through different detection techniques.