Climate‐associated genetic variation in Fagus sylvatica and potential responses to climate change in the French Alps

Local adaptation patterns have been found in many plants and animals, highlighting the genetic heterogeneity of species along their range of distribution. In the next decades, global warming is predicted to induce a change in the selective pressures that drive this adaptive variation, forcing a reshuffling of the underlying adaptive allele distributions. For species with low dispersion capacity and long generation time such as trees, the rapidity of the change could impede the migration of beneficial alleles and lower their capacity to track the changing environment. Identifying the main selective pressures driving the adaptive genetic variation is thus necessary when investigating species capacity to respond to global warming. In this study, we investigate the adaptive landscape of Fagus sylvatica along a gradient of populations in the French Alps. Using a double‐digest restriction‐site‐associated DNA (ddRAD) sequencing approach, we identified 7,000 SNPs from 570 individuals across 36 different sites. A redundancy analysis (RDA)‐derived method allowed us to identify several SNPs that were strongly associated with climatic gradients; moreover, we defined the primary selective gradients along the natural populations of F. sylvatica in the Alps. Strong effects of elevation and humidity, which contrast north‐western and south‐eastern site, were found and were believed to be important drivers of genetic adaptation. Finally, simulations of future genetic landscapes that used these findings allowed identifying populations at risk for F. sylvatica in the Alps, which could be helpful for future management plans.     

PELAGIC AND BENTHIC ENVIRONMENTAL CONTROLS ON THE SPATIAL DISTRIBUTION OF A VIABLE DIATOM PROPAGULE BANK ON THE SWEDISH WEST COAST1

The distribution of viable diatom resting stages in sediments on the Swedish west coast was assessed by the most probable number (MPN) culture technique. Multivariate analyses correlated benthic and pelagic environmental factors to the observed spatial variations in the size and taxonomic composition of the propagule bank. Viable diatom resting stages were plentiful (0.2–4.8 million cells·g ^{? 1} 1 Received 11 September 2001. Accepted 12 June 2002.
dry weight) and were dominated by the genera Skeletonema, Detonula, Chaetoceros, and Thalassiosira. Size of the propagule bank was primarily related to planktonic biomass (measured as chl a) and was highest in the Orust‐Tjörn fjord system. Species composition in this fjord system was dominated by D. confervacea (Cleve) Gran and T. nordenskioeldii Cleve in contrast to stations on the outer coast, which contained more cells of T. minima Gaarder, Asterionellopsis glacialis (Castracane) Round, and Leptocylindrus danicus Cleve. These taxonomic variations were principally influenced by deep water oxygen concentrations and water column stability. Benthic resting cells of S. costatum (Greville) Cleve were abundant all along the coast but showed reduced viability in low oxygen environments. Calculations based on MPN values estimated that resuspension of sediment could provide a sizable inoculum to the plankton, although the development of planktonic blooms will also depend on forces of hydrography and weather. Although benthic resting stages may not be absolutely necessary for survival of all diatoms, these cells may be important in determining species cycles, succession, and the spatial distribution of diatoms.     

The first record and occurrence of Stagnicola turricula (Held, 1836) (Gastropoda: Pulmonata: Lymnaeidae) in Upper Silesia (Southern Poland) in relation to different environmental factors

The degradation of freshwater environments, e.g.: eutrophication, drainage, water pollution, has led to the decline of lymnaeid species distribution. Some of them are recorded in the Red Book and Red List of species as rare, vulnerable or legally protected. The survey was carried out in Upper Silesia (Southern Poland), which is one of the biggest coal basins in the world. This region is devoid of natural water bodies; only reservoirs of an anthropogenic origin are common. Anthropogenic reservoirs, which are not very degraded, constitute important lentic habitats in Upper Silesia and they provide refuges for wildlife including rare and vulnerable molluscan species. This survey uncovered the first occurrence of Stagnicola turricula in the anthropogenic reservoirs in this area. S. turricula has been subdominant in molluscan communities. Sixteen molluscan species, including 11 gastropod and 5 bivalve species, were recorded at the sampling sites. Based on a redundancy analysis (RDA), the organic matter content in the bottom sediments and pH were the parameters most associated (statistically significant) with the distribution of molluscan species including S. turricula.     

Distribution and diversity of rhizobia associated with wild soybean (Glycine soja Sieb. & Zucc.) in Northwest China

A total of 155 nodule isolates that originated from seven sites in Northwest China were characterized by PCR-RFLP of the 16S rRNA gene and sequence analysis of multiple core genes (16S rRNA, recA, atpD, and glnII) in order to investigate the diversity and biogeography of Glycine soja-nodulating rhizobia. Among the isolates, 80 were Ensifer fredii, 19 were Ensifer morelense, 49 were Rhizobium radiobacter, and 7 were putative novel Rhizobium species. The phylogenies of E. fredii and E. morelense isolates in a concatenate tree (assembly of all housekeeping genes) were generally consistent with those in individual gene trees. However, incongruence was found in the phylogenies of the different genes of Rhizobium isolates, indicating that lateral transfer or recombination possibly occurred in these gene loci. Despite their species identity, all the isolates in this study formed a single lineage related to E. fredii in nodAand nifH gene phylogenies, which also indicated that the symbiotic genes were laterally transferred between different species. Biogeographic patterns were found at the species and strain genomic type levels, as revealed by BOXA1R fingerprinting, demonstrating that the evolution of rhizobial populations in different geographic locations was related to soil types, altitude and spatial effects. This study is the first to report that E. morelense, R. radiobacter, and Rhizobium sp. are microsymbionts of G. soja, as well as showing that the diversity of G. soja rhizobia is enhanced and new rhizobia have evolved in Northwest China.     

珠江口南沙河涌浮游植物群落结构时空变化及其与环境因子的关系

随着城市生态健康理念的提出,城市河涌生态健康也受到了前所未有的关注。为更好的了解河涌的水环境和浮游植物现状,于2015年3月至2016年2月对珠江口南沙河涌8个站位水环境和浮游植物群落结构进行调查。结果显示:共发现浮游植物164种(属),隶属7门73属,其中以绿藻种类最多,达33属79种,占48.17%;硅藻次之,17属41种,占25%。优势种为梅尼小环藻(Cyclotella meneghiniana)、假鱼腥藻属(Pseudanabaena sp.)和小球藻(Chlorella vulgaris)。浮游植物细胞密度在0.19×10~6—101.34×10~6个/L内变动,呈现单峰型,在4月发生拟菱形弓形藻(Schroederia nitzschioides)水华,14涌密度高达87.38×10~6个/L,随后因强降雨细胞密度骤降。浮游植物群落的季节演替基本符合PEG(Plankton Ecology Group)模型,从冬季的硅藻,到春夏季的绿藻,再到秋季的蓝藻。One-way ANOVA分析显示,各月份浮游植物细胞密度差异显著(P0.01)。Pearson相关性分析表明绿藻细胞丰度变化主导着浮游植物总丰度的变化(r=0.454,P0.01)。运用Margalef物种丰富度指数、Shannon物种多样性指数、Pielou均匀度指数对水体进行评价表明,调查水体呈中度污染。相关加权营养状态指数表明,河涌全年处于富营养化状态。浮游植物聚类分析表明,时间异质性较高,总体相似性较低;空间上相似性较高,人为活动可能是导致空间差异的关键因子。冗余分析显示,叶绿素a、溶解氧、盐度、水温、总氮和p H与浮游植物群落结构关系最为密切。p H对硅藻门浮游植物影响较大,碱性条件适宜直链藻生长,春季水华形成的驱动因子是盐度、温度和总氮。     

林火对植物根围丛枝菌根真菌多样性的影响

林火是森林生态系统的一种主要干扰因子,以青岛市三标山林火迹地为研究对象,采集荆条(Vitex negundo)、胡枝子(Lespedeza bicolor)、花木蓝(Indigofera kirilowii)、青花椒(Zanthoxylum schinifolium)和野青茅(Deyeuxia arundinacea)5种优势植物根围土壤,研究不同林火强度对丛枝菌根(AM)真菌多样性的影响。结果表明,AM真菌侵染率和孢子密度随火灾强度的加强而降低;非过火区植物根围土壤中,分离鉴定出AM真菌3属11种,轻度过火区分离鉴定出AM真菌3属10种,中度过火区分离鉴定出AM真菌3属9种,重度过火区分离鉴定出AM真菌3属8种。过火区AM真菌种丰度低于非过火区。过火区和非过火区AM真菌的重要值和优势种不同,非过火区植物根围的优势种是地球囊霉(Glomus geosporum)、台湾球囊霉(G.taiwanensis)、分支巨孢囊霉(Gigaspora ramisporophora)、极大巨孢囊霉(Gi.gigantean)、福摩萨球囊霉(G.formosanum)、悬钩子球囊霉(G.rubiforme)、柯氏无梗囊霉(Acaulospora koskei)和松蜜无梗囊霉(A.thomii);轻度过火区植物根围的优势种是地球囊霉和台湾球囊霉;中度过火区的是台湾球囊霉和地球囊霉(野青茅除外);重度过火区植物根围的优势种是地球囊霉。不同强度的过火区对AM真菌群落组成有不同程度的影响。认为林火降低植物根围土壤中AM真菌多样性。     

黄土区露天煤矿排土场土壤与地形因子对植被恢复的影响

在脆弱的生态环境改善和恢复过程中,植被恢复与重建扮演着重要的角色。黄土露天煤矿区生态环境极其脆弱,认识矿区损毁土地植被恢复与地形、土壤因子之间的作用规律对矿区土地复垦与生态恢复改善至关重要。为此,选择山西平朔安太堡露天煤矿南排土场对2条样带27个复垦样地的土壤、地形、植被参数进行了采集与测定,并应用单因素方差分析与CANOCO4.5软件的降趋势对应分析和冗余分析研究了地形与土壤因子对植被恢复的影响。结果表明:植被与土壤变量之间呈显著相关,与地形变量之间相关性不明显;坡度主要影响草本覆盖度,坡向与有机质和速效磷之间具有线性相关性;速效钾对植被的变化起着重要的作用;土壤容重与砾石含量对土壤养分含量具有明显的指示作用;有机质与全氮呈显著正相关,各土壤养分指标之间存在明显的相关关系。为了改善和恢复黄土区露天煤矿排土场脆弱的生态系统,应该考虑植被和土壤的联合演替。在当地的生态环境状况下土地复垦与生态恢复的关键是改善土壤状况和增加人工植被,同时加强对排土场人工和自然植被的保护。