Effects of the winter beechmast crop on bird occurrence in British gardens

Capsule Woodland birds were significantly less likely to occur in gardens in years of high beechmast crop.

Aim To test the hypothesis that woodland species that feed on beechmast will have significantly lower occurrence rates at garden feeders in mast years.

Methods Weekly winter occurrence rates at garden feeders between 1970/71 and 1999/2000 for 40 species were analysed in relation to annual beechmast abundance, classified into low, medium and high years. A repeated-measures logistic regression model was used to assess whether beechmast abundance explained further significant variation additional to underlying seasonal and annual trends.

Results Seven species that commonly feed on beechmast showed significantly lower occurrence in gardens in years of highest beechmast abundance: Great Spotted Woodpecker Dendrocopos major, Woodpigeon Columba palumbus, Great Tit Parus major, Coal Tit Periparus ater, Nuthatch Sitta europaea, Jay Garrulus glandarius and Chaffinch Fringilla coelebs. Blackbird Turdus merula and Siskin Carduelis spinus, which showed similar significant patterns, are likely to take beechmast as elements of their diet. Pied Wagtail Motacilla alba was the only insectivorous species to show significant effects, but occurrence was lowest in years of intermediate beechmast abundance. For the latter species, this may have been due to confounding effects of temperature, but there were no such confounding effects of either temperature, or the number of bird feeders provided in gardens, for the other nine species.

Conclusion Use of artificial food sources by birds in gardens is influenced by resources in the surrounding countryside, suggesting that food provided in gardens may play a significant part in the population dynamics of these species, that population monitoring without consideration of the garden habitat may be deficient, and that volunteer-based garden bird recording may provide data that can be used as an indicator of changes in the wider countryside.     

The easy road to genome‐wide medium density SNP screening in a non‐model species: development and application of a 10 K SNP‐chip for the house sparrow (Passer domesticus)

With the advent of next generation sequencing, new avenues have opened to study genomics in wild populations of non‐model species. Here, we describe a successful approach to a genome‐wide medium density Single Nucleotide Polymorphism (SNP) panel in a non‐model species, the house sparrow (Passer domesticus), through the development of a 10 K Illumina iSelect HD BeadChip. Genomic DNA and cDNA derived from six individuals were sequenced on a 454 GS FLX system and generated a total of 1.2 million sequences, in which SNPs were detected. As no reference genome exists for the house sparrow, we used the zebra finch (Taeniopygia guttata) reference genome to determine the most likely position of each SNP. The 10 000 SNPs on the SNP‐chip were selected to be distributed evenly across 31 chromosomes, giving on average one SNP per 100 000 bp. The SNP‐chip was screened across 1968 individual house sparrows from four island populations. Of the original 10 000 SNPs, 7413 were found to be variable, and 99% of these SNPs were successfully called in at least 93% of all individuals. We used the SNP‐chip to demonstrate the ability of such genome‐wide marker data to detect population sub‐division, and compared these results to similar analyses using microsatellites. The SNP‐chip will be used to map Quantitative Trait Loci (QTL) for fitness‐related phenotypic traits in natural populations.     

Biparental care in house sparrows: negotiation or sealed bid?

We explored the responses of monogamous house sparrow parentsto deviations in their mates' contributions to nestling provisioning.Following 1-2 days of baseline measurement of parental fooddelivery rates, we applied small lead fishing weights to thetail feathers of either male or female parents. Weighting hadmuch greater immediate impact on male parental care than on female care, but the handicapping had little long-term effecton either male or female provisioning behavior. When parentalperformance of handicapped males was most impaired, their matesdid not show significant increases in parental care as compensation,nor did females mated to handicapped males reduce their provisioningas their mates recovered from weighting. Similarly, males matedto handicapped females did not respond to their partners' recovery with declines in their own efforts; paradoxically, these malesshowed a sustained elevation of provisioning throughout thepost-treatment interval, despite no significant reduction inprovisioning by weighted females. The apparent insensitivityof both males and females to changes in their mates' parentalbehavior, and the ineffectiveness of current partner behaviorat predicting an individual's provisioning effort, fail toconform to assumptions of biparental care models that requirefacultative responses to partner deviations in effort. Instead,the remarkable consistency of each individual's behavior supportsthe notion of "sealed bids" and suggests that variation innestling provisioning is largely attributable to factors thatare independent of the mate's current behavior, such as differencesin individual quality.     

Experimental manipulation of timing of breeding suggests laying order instead of breeding synchrony affects extra-pair paternity in house sparrows

The timing of breeding may not only affect breeding patterns such as the overlap of chick rearing period with the peak in food availability but also the opportunity for extra-pair mating. A negative relationship has been predicted between extra-pair paternity and breeding synchrony, assuming that male extra-pair activity is traded against mate guarding and parenting duties. In contrast, if female ability to assess male quality is temporally constrained, sperm competition might be a positive function of breeding synchrony. Here we manipulated the progress of nesting by nest material exchange within nesting aggregations to see whether the timing of breeding affects extra-pair paternity in house sparrows. We found that late broods within nesting clusters contained extra-pair young more often than early broods, but breeding synchrony did not turn out to be a significant predictor of extra-pair paternity. Our study indicates that temporal constraints of male extra-pair activity may account for extra-pair paternity levels, but it is also possible that late-breeding females may accept extra-pair copulations to ensure egg fertilization.     

Spatial heterogeneity in genetic relatedness among house sparrows along an urban-rural gradient as revealed by individual-based analysis

Understanding factors that shape patterns of kinship in sedentary species is important for evolutionary ecologists as well as conservation biologists. Yet, how patterns of relatedness are hierarchically structured in space remains poorly known, even in common species. Here, we use information from 16 polymorphic microsatellite DNA markers to study how small-scale kinship structure varies among house sparrows (Passer domesticus) along an urban-rural gradient. Average levels of relatedness were higher among urban individuals than among individuals from rural areas, suggesting lower rates of dispersal in more built-up habitats. Comparison of observed levels of relatedness with simulated distributions of known kinship values showed that central urban individuals had the highest proportion of closely related conspecifics in their immediate neighbourhood. Spatial auto-correlograms supported this small-scale genetic structure and further indicated stronger effects of genetic drift and/or limited dispersal in urban populations. Results of this study underscore the importance of individual-level analyses as a complementary approach to traditional population-level analyses when studying genetic population structure over small spatial scales.     

Hormone levels predict individual differences in reproductive success in a passerine bird

Hormones mediate major physiological and behavioural components of the reproductive phenotype of individuals. To understand basic evolutionary processes in the hormonal regulation of reproductive traits, we need to know whether, and during which reproductive phases, individual variation in hormone concentrations relates to fitness in natural populations. We related circulating concentrations of prolactin and corticosterone to parental behaviour and reproductive success during both the pre-breeding and the chick-rearing stages in both individuals of pairs of free-living house sparrows, Passer domesticus. Prolactin and baseline corticosterone concentrations in pre-breeding females, and prolactin concentrations in pre-breeding males, predicted total number of fledglings. When the strong effect of lay date on total fledgling number was corrected for, only pre-breeding baseline corticosterone, but not prolactin, was negatively correlated with the reproductive success of females. During the breeding season, nestling provisioning rates of both sexes were negatively correlated with stress-induced corticosterone levels. Lastly, individuals of both sexes with low baseline corticosterone before and high baseline corticosterone during breeding raised the most offspring, suggesting that either the plasticity of this trait contributes to reproductive success or that high parental effort leads to increased hormone concentrations. Thus hormone concentrations both before and during breeding, as well as their seasonal dynamics, predict reproductive success, suggesting that individual variation in absolute concentrations and in plasticity is functionally significant, and, if heritable, may be a target of selection.     

Plasmodium relictum infection and MHC diversity in the house sparrow (Passer domesticus)

Antagonistic coevolution between hosts and parasites has been proposed as a mechanism maintaining genetic diversity in both host and parasite populations. In particular, the high level of genetic diversity usually observed at the major histocompatibility complex (MHC) is generally thought to be maintained by parasite-driven selection. Among the possible ways through which parasites can maintain MHC diversity, diversifying selection has received relatively less attention. This hypothesis is based on the idea that parasites exert spatially variable selection pressures because of heterogeneity in parasite genetic structure, abundance or virulence. Variable selection pressures should select for different host allelic lineages resulting in population-specific associations between MHC alleles and risk of infection. In this study, we took advantage of a large survey of avian malaria in 13 populations of the house sparrow (Passer domesticus) to test this hypothesis. We found that (i) several MHC alleles were either associated with increased or decreased risk to be infected with Plasmodium relictum, (ii) the effects were population specific, and (iii) some alleles had antagonistic effects across populations. Overall, these results support the hypothesis that diversifying selection in space can maintain MHC variation and suggest a pattern of local adaptation where MHC alleles are selected at the local host population level.     

Correlates of cell-mediated immunity in nestling house sparrows

Cell-mediated immunity is an important vertebrate defense against pathogens, but components of this response may vary in quality. Such variation could arise through the effects of ecology on optimal immunocompetence. We used injections of phytohaemagglutinin (PHA) to measure the factors influencing T-cell proliferation in nestling house sparrows (Passer domesticus). Bivariate analyses revealed positive associations with nestling mass and size, but no effect of ectoparasites. The response to PHA was, however, strongly affected by brood identity. A mixed model with brood identity as a random factor and nestling mass, size, number of ectoparasites, parental feeding rate, clutch size, brood size at hatching, and date uncovered significant positive correlations between PHA response and both nestling mass and the brood size at hatching. Because many of these variables are related hierarchically, we used path analysis to explore the relationships in more detail. We found that a nestling immune response was affected by several indirect paths. Brood size at hatch had both positive and negative paths, and date in the season had several indirect negative effects through its effect on brood size and nestling mass. The approach used and the results obtained offer some new ideas for incorporating immune responses into life history theory.